| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10160 | 1:7,747,096-7,747,760 | + | C2H1g06851 | - | LOC_Os01g15448 | Os01g0258600 | DPL1 | Detail |
| C1H1g11696 | 1:7,748,978-7,754,179 | - | C2H1g15283 | CX1g001399 | LOC_Os01g15460 | Os01g0258700 | - | Detail |
| C1H1g20506 | 1:7,771,486-7,775,958 | + | C2H1g09950 | CX1g003110 | LOC_Os01g15470 | Os01g0259200 | - | Detail |
| C1H1g17517 | 1:7,779,774-7,787,623 | - | C2H1g28752 | CX1g001265 | LOC_Os01g15480 | Os01g0259400 | - | Detail |
| C1H1g01918 | 1:7,788,145-7,795,819 | - | C2H1g29310 | CX1g004135 | LOC_Os01g15490 | Os01g0259600 | - | Detail |
| C1H1g28512 | 1:7,805,968-7,809,818 | + | C2H1g13360 | CX1g001587 | LOC_Os01g15520 | Os01g0259900 | SAD1L | Detail |
| C1H1g08431 | 1:7,824,104-7,830,671 | - | C2H1g27356 | CX1g003982 | LOC_Os01g15540 | Os01g0260100 | - | Detail |
| C1H1g25542 | 1:7,847,298-7,851,067 | + | C2H1g27729 | CX1g006574 | LOC_Os01g15600 | Os01g0260700 | OsPurα | Detail |
| C1H1g03478 | 1:7,855,061-7,860,868 | + | C2H1g08136 | CX1g004819 | LOC_Os01g15610 | Os01g0260800 | OsCIF2 | Detail |
| C1H1g30736 | 1:7,867,472-7,873,257 | + | C2H1g02816 | CX1g004757 | LOC_Os01g15630 | Os01g0261100 | - | Detail |
| C1H1g05155 | 1:7,873,583-7,877,864 | - | C2H1g13520 | CX1g003663 | LOC_Os01g15640 | Os01g0261200 | - | Detail |
| C1H1g07642 | 1:7,883,397-7,886,630 | + | C2H1g20114 | CX1g001002 | LOC_Os01g15660 | Os01g0261500 | - | Detail |
| C1H1g29935 | 1:7,889,088-7,890,539 | - | C2H1g06642 | CX1g006778 | LOC_Os01g15709 | Os01g0261700 | - | Detail |
| C1H1g11248 | 1:7,893,211-7,894,617 | - | C2H1g12900 | CX1g000782 | LOC_Os01g15709 | Os01g0261700 | - | Detail |
| C1H1g21194 | 1:7,900,866-7,901,945 | - | C2H1g12284 | CX1g000782 | LOC_Os01g15709 | Os01g0261700 | - | Detail |
| C1H1g29482 | 1:7,916,999-7,918,914 | + | C2H1g07674 | CX1g000618 | LOC_Os01g15770 | Os01g0262500 | - | Detail |
| C1H1g02857 | 1:7,919,068-7,924,991 | - | C2H1g00956 | CX1g004525 | LOC_Os01g15780 | Os01g0262600 | OsGT1 | Detail |
| C1H1g17535 | 1:7,927,735-7,934,942 | + | C2H1g29692 | CX1g007017 | LOC_Os01g15790 | Os01g0262700 | - | Detail |
| C1H1g09557 | 1:7,936,114-7,937,134 | + | C2H1g07028 | CX1g004307 | LOC_Os01g15800 | - | - | Detail |
| C1H1g21240 | 1:7,938,148-7,939,922 | - | C2H1g02259 | CX1g003830 | LOC_Os01g15810 | Os01g0263000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g30640 | 4:1,719,255-1,723,962 | + | C1H4g17799 | CX4g036248 | LOC_Os04g04330 | Os04g0132500 | CTB4a, OsRLCK127, RLCK127 | Detail |
| C2H4g19144 | 4:1,739,532-1,740,113 | - | C1H4g19447 | CX4g034832 | - | - | - | Detail |
| C2H4g05610 | 4:1,764,995-1,767,457 | + | C1H4g23533 | CX4g032097 | LOC_Os04g04750 | Os04g0134800 | - | Detail |
| C2H4g00703 | 4:1,777,022-1,779,592 | - | C1H4g07028 | CX4g035198 | LOC_Os04g04670 | Os04g0125700 | - | Detail |
| C2H4g09916 | 4:1,791,202-1,791,932 | - | C1H4g07028 | CX4g032348 | LOC_Os04g04770 | Os04g0125700 | - | Detail |
| C2H4g15842 | 4:1,841,229-1,843,356 | + | C1H4g07028 | CX4g032198 | LOC_Os04g04670 | Os04g0125700 | - | Detail |
| C2H4g06784 | 4:1,926,268-1,927,874 | + | C1H4g07028 | CX4g034389 | LOC_Os04g04670 | Os04g0136000 | - | Detail |
| C2H4g27188 | 4:1,989,202-1,989,675 | - | - | CX4g032153 | - | - | - | Detail |
| C2H4g18525 | 4:2,014,982-2,015,732 | - | - | CX4g034918 | - | - | - | Detail |
| C2H4g26240 | 4:2,023,261-2,024,654 | - | C1H4g07028 | CX4g032163 | LOC_Os04g05470 | Os04g0125700 | - | Detail |
| C2H4g08696 | 4:2,025,532-2,026,003 | - | C1H4g07028 | CX4g032163 | LOC_Os04g05470 | Os04g0140666 | - | Detail |
| C2H4g14822 | 4:2,053,699-2,054,665 | - | C1H4g07028 | CX4g032348 | LOC_Os04g04770 | Os04g0125700 | - | Detail |
| C2H4g13248 | 4:2,075,582-2,078,396 | - | C1H4g07691 | CX4g036479 | LOC_Os04g05010 | Os04g0136700 | - | Detail |
| C2H4g08946 | 4:2,087,740-2,089,679 | + | C1H4g00435 | CX4g033792 | LOC_Os04g05030 | Os04g0136900 | - | Detail |
| C2H4g24029 | 4:2,119,317-2,124,783 | + | C1H4g17319 | CX4g036173 | LOC_Os04g05050 | Os04g0137201 | OsPLL4.2 | Detail |
| C2H4g03790 | 4:2,139,695-2,140,441 | - | C1H4g22056 | CX4g032910 | LOC_Os04g05070 | Os04g0137450 | - | Detail |
| C2H4g29226 | 4:2,148,952-2,152,002 | + | C1H4g09732 | CX4g033283 | LOC_Os04g05080 | Os04g0137500 | - | Detail |
| C2H4g11106 | 4:2,167,536-2,167,985 | - | - | - | - | - | - | Detail |
| C2H4g03441 | 4:2,178,143-2,186,459 | - | C1H4g13170 | CX4g035554 | LOC_Os04g05470 | Os04g0140400 | - | Detail |
| C2H4g16775 | 4:2,186,503-2,187,141 | - | C1H4g07028 | CX4g035554 | LOC_Os04g05470 | Os04g0140666 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |