| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g19094 | 12:22,115,782-22,116,300 | + | C2H12g21638 | CX12g016957 | LOC_Os12g37690 | Os12g0633501 | - | Detail |
| C1H12g26279 | 12:22,118,441-22,123,267 | - | C2H12g22600 | CX12g017722 | LOC_Os12g43720 | Os12g0633600 | - | Detail |
| C1H12g00546 | 12:22,128,762-22,129,646 | - | C2H12g28210 | CX12g016387 | LOC_Os12g43740 | Os12g0633800 | - | Detail |
| C1H12g12854 | 12:22,132,770-22,133,645 | + | C2H12g02573 | CX12g016782 | LOC_Os12g43750 | Os12g0634000 | - | Detail |
| C1H12g07099 | 12:22,136,614-22,137,484 | - | C2H12g02474 | CX12g015900 | LOC_Os12g43780 | Os12g0634400 | - | Detail |
| C1H12g31416 | 12:22,142,334-22,142,849 | - | C2H12g10535 | CX12g016721 | LOC_Os12g43790 | Os12g0634500 | - | Detail |
| C1H12g09994 | 12:22,152,223-22,152,585 | - | C2H12g09988 | CX12g016381 | LOC_Os12g43810 | Os12g0634600 | - | Detail |
| C1H12g20787 | 12:22,155,870-22,156,328 | + | C2H12g13239 | CX12g018449 | LOC_Os12g43820 | Os12g0634700 | - | Detail |
| C1H12g26620 | 12:22,157,245-22,159,475 | - | C2H12g04752 | CX12g017507 | LOC_Os12g43830 | Os12g0634800 | - | Detail |
| C1H12g23284 | 12:22,160,327-22,165,373 | - | C2H12g14043 | CX12g015685 | LOC_Os12g43840 | Os12g0634900 | - | Detail |
| C1H12g19572 | 12:22,168,402-22,168,740 | - | C2H12g10894 | CX12g017404 | - | Os12g0635400 | - | Detail |
| C1H12g19671 | 12:22,171,421-22,171,645 | + | - | - | - | - | - | Detail |
| C1H12g16817 | 12:22,172,019-22,172,351 | + | C2H12g21094 | CX12g016578 | - | - | - | Detail |
| C1H12g22776 | 12:22,175,025-22,176,619 | + | C2H12g05582 | CX12g018765 | LOC_Os12g43880 | Os12g0635500 | - | Detail |
| C1H12g03451 | 12:22,180,156-22,181,040 | - | C2H12g16074 | CX12g016983 | LOC_Os12g43890 | Os12g0635700 | - | Detail |
| C1H12g16590 | 12:22,186,402-22,188,490 | + | C2H12g10893 | CX12g017866 | LOC_Os12g43930 | Os12g0636000 | - | Detail |
| C1H12g23273 | 12:22,189,288-22,193,875 | + | C2H12g05681 | CX12g018578 | LOC_Os12g43940 | Os12g0636100 | - | Detail |
| C1H12g13304 | 12:22,194,282-22,199,556 | - | C2H12g04482 | CX12g017078 | LOC_Os12g43950 | Os12g0636200 | - | Detail |
| C1H12g02175 | 12:22,209,658-22,211,498 | - | C2H12g23640 | CX12g018141 | LOC_Os12g43970 | Os12g0636400 | - | Detail |
| C1H12g12356 | 12:22,217,332-22,217,895 | - | C2H12g28156 | CX12g015203 | LOC_Os12g43990 | Os12g0636700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g06230 | 1:37,866,930-37,871,484 | + | C1H1g13352 | CX1g002939 | LOC_Os01g73670 | Os01g0967800 | - | Detail |
| C2H1g07305 | 1:37,871,954-37,875,965 | + | C1H1g07633 | CX1g005310 | LOC_Os01g73680 | Os01g0967900 | - | Detail |
| C2H1g24781 | 1:37,876,161-37,879,640 | - | C1H1g14048 | CX1g006659 | LOC_Os01g73690 | Os01g0968000 | - | Detail |
| C2H1g19836 | 1:37,880,656-37,881,725 | - | C1H1g07671 | CX1g001860 | LOC_Os01g73700 | Os01g0968100 | - | Detail |
| C2H1g12288 | 1:37,884,726-37,885,832 | - | C1H1g25633 | CX1g001112 | LOC_Os01g73710 | Os01g0968300 | - | Detail |
| C2H1g30656 | 1:37,887,127-37,888,202 | + | C1H1g15511 | CX1g005452 | LOC_Os01g73720 | Os01g0968300 | - | Detail |
| C2H1g10869 | 1:37,889,584-37,890,307 | - | - | - | - | - | - | Detail |
| C2H1g12190 | 1:37,891,424-37,892,541 | + | C1H1g06129 | CX1g004852 | LOC_Os01g73730 | Os01g0968400 | - | Detail |
| C2H1g03426 | 1:37,893,182-37,901,021 | + | C1H1g29656 | CX1g005277 | LOC_Os01g73750 | Os01g0968600 | - | Detail |
| C2H1g06476 | 1:37,901,194-37,903,663 | + | C1H1g20404 | CX1g005277 | LOC_Os01g73760 | Os01g0968700 | - | Detail |
| C2H1g09238 | 1:37,914,290-37,915,841 | - | C1H1g28424 | CX1g003644 | LOC_Os01g73780 | Os01g0969000 | - | Detail |
| C2H1g20740 | 1:37,916,404-37,919,935 | - | C1H1g31794 | CX1g006205 | LOC_Os01g73790 | Os01g0969100 | - | Detail |
| C2H1g09544 | 1:37,931,373-37,934,633 | + | C1H1g01507 | CX1g003584 | LOC_Os01g73880 | Os01g0970400 | - | Detail |
| C2H1g13571 | 1:37,936,699-37,937,995 | + | C1H1g08350 | CX1g002862 | LOC_Os01g73890 | Os01g0970500 | OsTFIIAgamma1, OsTFIIAγ1 | Detail |
| C2H1g20677 | 1:37,938,706-37,942,359 | - | C1H1g18423 | CX1g006271 | LOC_Os01g73900 | Os01g0970600 | OsRH58 | Detail |
| C2H1g02029 | 1:37,943,319-37,945,551 | - | C1H1g08408 | CX1g001477 | LOC_Os01g73910 | Os01g0970700 | - | Detail |
| C2H1g20906 | 1:37,946,433-37,951,438 | - | C1H1g27707 | CX1g000299 | LOC_Os01g73950 | Os01g0970900 | - | Detail |
| C2H1g18524 | 1:37,954,823-37,956,933 | + | C1H1g24776 | CX1g003601 | LOC_Os01g73960 | Os01g0971100 | OsDi19-5 | Detail |
| C2H1g12108 | 1:37,958,395-37,962,839 | - | C1H1g21855 | CX1g003985 | LOC_Os01g73970 | Os01g0971200 | - | Detail |
| C2H1g29254 | 1:37,965,185-37,966,963 | + | C1H1g24112 | CX1g001229 | LOC_Os01g73980 | Os01g0971400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |