| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g07071 | 12:21,957,061-21,957,725 | + | C2H12g17471 | CX12g016272 | LOC_Os12g43510 | Os12g0630600 | - | Detail |
| C1H12g22486 | 12:21,965,872-21,969,970 | - | C2H12g09484 | CX12g015545 | LOC_Os12g43520 | Os12g0630700 | - | Detail |
| C1H12g11560 | 12:21,981,718-21,983,740 | - | C2H12g25329 | CX12g016310 | LOC_Os12g43530 | Os12g0630800 | - | Detail |
| C1H12g09376 | 12:21,989,393-21,990,963 | - | C2H12g25879 | CX12g015757 | LOC_Os12g43540 | - | - | Detail |
| C1H12g14081 | 12:22,003,020-22,005,723 | + | C2H12g18348 | CX12g016796 | LOC_Os12g43550 | Os12g0631100 | - | Detail |
| C1H12g22744 | 12:22,006,487-22,009,525 | - | C2H12g25852 | CX12g015901 | LOC_Os12g43560 | Os12g0631200 | - | Detail |
| C1H12g14996 | 12:22,025,359-22,028,079 | + | C2H12g12885 | CX12g018492 | LOC_Os12g43580 | Os12g0631600 | - | Detail |
| C1H12g31710 | 12:22,031,033-22,036,065 | - | C2H12g12624 | CX12g017284 | LOC_Os12g43590 | Os12g0631800 | - | Detail |
| C1H12g07284 | 12:22,038,905-22,039,936 | + | C2H12g20777 | CX12g016267 | LOC_Os12g43600 | Os12g0632000 | GRP162 | Detail |
| C1H12g03802 | 12:22,040,921-22,042,000 | - | C2H12g23438 | CX12g015117 | - | - | - | Detail |
| C1H12g29429 | 12:22,050,156-22,050,380 | - | C2H12g12031 | CX4g034444 | LOC_Os12g37680 | - | - | Detail |
| C1H12g13426 | 12:22,062,847-22,064,370 | + | C2H12g01034 | CX12g016286 | LOC_Os12g43620 | Os12g0632600 | - | Detail |
| C1H12g04328 | 12:22,068,932-22,073,505 | - | C2H12g20024 | CX12g015301 | LOC_Os12g43630 | Os12g0632700 | OsMDH12.1 | Detail |
| C1H12g10372 | 12:22,083,672-22,086,692 | + | C2H12g27312 | CX12g016541 | LOC_Os12g43640 | Os12g0632800 | OsRLK7, OsRLK7-1, MEG1 | Detail |
| C1H12g06527 | 12:22,095,449-22,099,254 | + | C2H12g28515 | CX12g016694 | LOC_Os12g43660 | Os12g0632900 | - | Detail |
| C1H12g30873 | 12:22,101,249-22,104,754 | - | C2H12g15659 | CX12g017780 | LOC_Os12g43664 | Os12g0633000 | - | Detail |
| C1H12g26820 | 12:22,106,212-22,107,602 | - | C2H12g01218 | CX12g015772 | LOC_Os12g43670 | Os12g0633200 | - | Detail |
| C1H12g26413 | 12:22,107,508-22,107,768 | + | C2H12g01435 | - | - | Os12g0633301 | - | Detail |
| C1H12g13713 | 12:22,111,379-22,111,762 | - | C2H12g14505 | CX12g017271 | LOC_Os12g43700 | Os12g0633400 | - | Detail |
| C1H12g06041 | 12:22,111,807-22,112,706 | - | C2H12g00958 | CX12g017271 | LOC_Os12g43700 | Os12g0633400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02733 | 1:884,535-889,937 | + | C1H1g26055 | - | LOC_Os01g02890 | Os01g0118300 | SUI1, OsSUI1, OsPSS-1, PSS-1, OsPSS1, PSS1 | Detail |
| C2H1g25728 | 1:894,155-897,038 | - | C1H1g13587 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g24887 | 1:905,925-909,298 | - | C1H1g19340 | - | LOC_Os01g02910 | Os01g0118600 | - | Detail |
| C2H1g16133 | 1:911,678-914,437 | - | C1H1g28376 | - | LOC_Os01g02920 | Os01g0118700 | - | Detail |
| C2H1g28060 | 1:918,001-920,692 | - | C1H1g06299 | - | LOC_Os01g02930 | Os01g0119000 | - | Detail |
| C2H1g09306 | 1:929,892-933,650 | - | C1H1g29708 | - | LOC_Os01g02940 | Os01g0119100 | - | Detail |
| C2H1g08550 | 1:940,072-940,593 | + | C1H1g13986 | - | - | - | - | Detail |
| C2H1g16398 | 1:943,043-943,377 | - | - | - | - | - | - | Detail |
| C2H1g12790 | 1:949,262-951,056 | - | C1H1g01366 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g11248 | 1:951,971-959,371 | - | C1H1g03260 | CX1g005069 | LOC_Os01g03020 | Os01g0120300 | - | Detail |
| C2H1g00360 | 1:959,862-962,390 | - | C1H1g11508 | CX1g001161 | LOC_Os01g03030 | Os01g0120400 | - | Detail |
| C2H1g23693 | 1:963,663-965,148 | - | C1H1g03575 | CX1g002228 | LOC_Os01g03040 | Os01g0120500 | - | Detail |
| C2H1g04453 | 1:966,291-968,290 | + | C1H1g25620 | CX1g000645 | LOC_Os01g03050 | Os01g0120600 | - | Detail |
| C2H1g02238 | 1:969,438-970,298 | - | - | CX1g004156 | LOC_Os01g03060 | Os01g0120700 | OsHRC | Detail |
| C2H1g07428 | 1:972,581-979,601 | - | C1H1g21397 | CX1g002673 | LOC_Os01g03070 | Os01g0120800 | - | Detail |
| C2H1g00585 | 1:982,117-982,722 | + | - | CX1g000024 | LOC_Os01g03080 | Os01g0121000 | - | Detail |
| C2H1g24271 | 1:984,465-987,582 | + | C1H1g11884 | CX1g003419 | LOC_Os01g03090 | Os01g0121100 | - | Detail |
| C2H1g00075 | 1:988,256-990,528 | - | C1H1g21163 | CX1g006351 | LOC_Os01g03100 | Os01g0121200 | - | Detail |
| C2H1g03352 | 1:998,181-1,003,121 | - | C1H1g02205 | CX1g000986 | LOC_Os01g03110 | Os01g0121300 | - | Detail |
| C2H1g22579 | 1:1,018,666-1,019,160 | - | C1H1g30654 | CX1g006139 | LOC_Os01g03130 | Os01g0121500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |