| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g18825 | 12:20,580,988-20,594,260 | + | C2H12g27703 | CX12g017711 | - | - | - | Detail |
| C1H12g14359 | 12:20,601,437-20,604,264 | - | C2H12g23900 | CX12g018160 | LOC_Os12g40970 | - | - | Detail |
| C1H12g10009 | 12:20,617,963-20,621,069 | + | - | - | - | - | - | Detail |
| C1H12g02524 | 12:20,654,707-20,655,489 | - | C2H12g15774 | CX12g018770 | LOC_Os12g41030 | Os12g0602966 | SKL2-1 | Detail |
| C1H12g14138 | 12:20,656,485-20,656,862 | - | C2H12g00859 | CX12g015042 | - | - | - | Detail |
| C1H12g18431 | 12:20,684,951-20,686,563 | + | C2H11g15715 | CX1g002418 | LOC_Os01g46200 | Os12g0231700 | - | Detail |
| C1H12g21999 | 12:20,687,801-20,690,815 | - | C2H12g02053 | CX12g015892 | LOC_Os12g41060 | Os12g0603300 | - | Detail |
| C1H12g27138 | 12:20,703,788-20,705,945 | - | C2H12g08947 | CX12g018548 | LOC_Os12g40960 | Os12g0602450 | SKL1 | Detail |
| C1H12g22366 | 12:20,716,755-20,719,764 | - | C2H12g13167 | CX12g015892 | LOC_Os12g41060 | Os12g0603300 | - | Detail |
| C1H12g11611 | 12:20,727,791-20,728,402 | - | C2H12g10737 | - | - | - | - | Detail |
| C1H12g06197 | 12:20,740,830-20,742,188 | - | C2H12g20271 | CX12g018729 | LOC_Os12g41090 | Os12g0603700 | - | Detail |
| C1H12g15716 | 12:20,758,346-20,758,852 | + | C2H12g25612 | CX12g015553 | LOC_Os12g41110 | Os12g0603800 | - | Detail |
| C1H12g14337 | 12:20,786,681-20,786,914 | - | C2H12g22105 | CX12g015565 | LOC_Os12g41140 | - | - | Detail |
| C1H12g24392 | 12:20,786,917-20,792,527 | - | C2H12g19927 | CX12g015565 | LOC_Os12g41140 | Os12g0604200 | - | Detail |
| C1H12g04820 | 12:20,801,535-20,802,956 | + | C2H12g22739 | CX12g016903 | LOC_Os12g41160 | Os12g0604500 | - | Detail |
| C1H12g09963 | 12:20,804,710-20,812,253 | + | C2H12g04417 | CX12g017392 | LOC_Os12g41170 | Os12g0604600 | - | Detail |
| C1H12g00965 | 12:20,813,899-20,818,178 | - | C2H12g14370 | CX12g016784 | LOC_Os12g41180 | Os12g0604700 | - | Detail |
| C1H12g10619 | 12:20,824,529-20,828,544 | - | C2H12g22374 | CX12g015334 | LOC_Os12g41190 | Os12g0604800 | - | Detail |
| C1H12g01386 | 12:20,829,528-20,838,311 | - | C2H12g12219 | CX12g016681 | LOC_Os12g41200 | Os12g0605200 | - | Detail |
| C1H12g29532 | 12:20,846,867-20,850,869 | - | C2H12g25034 | CX12g016794 | LOC_Os12g41210 | Os12g0605300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g26133 | 3:3,546,686-3,547,895 | - | C1H3g27650 | CX3g029291 | LOC_Os03g08090 | Os03g0178300 | - | Detail |
| C2H3g08383 | 3:3,548,951-3,551,815 | - | C1H3g28165 | CX3g026682 | LOC_Os03g08100 | Os03g0178400 | - | Detail |
| C2H3g20309 | 3:3,553,463-3,558,745 | - | C1H3g16865 | CX3g026682 | LOC_Os03g08110 | Os03g0178500 | - | Detail |
| C2H3g17693 | 3:3,563,244-3,564,360 | + | - | - | - | - | - | Detail |
| C2H3g04420 | 3:3,564,723-3,571,308 | + | C1H3g20528 | CX3g027590 | LOC_Os03g08140 | Os03g0179000 | OsTTLL12 | Detail |
| C2H3g12070 | 3:3,571,631-3,572,308 | + | C1H3g07823 | CX3g025130 | LOC_Os03g08150 | Os03g0179100 | - | Detail |
| C2H3g20817 | 3:3,573,932-3,574,333 | + | C1H3g18493 | CX3g029368 | LOC_Os03g07750 | Os03g0179200 | - | Detail |
| C2H3g13195 | 3:3,574,344-3,575,733 | + | C1H3g14467 | CX3g029368 | LOC_Os03g07970 | Os03g0176800 | - | Detail |
| C2H3g08147 | 3:3,583,061-3,588,133 | + | C1H3g20366 | CX3g028669 | LOC_Os03g08170 | Os03g0179400 | RLCK103, GUDK, OsRLCK103 | Detail |
| C2H3g15441 | 3:3,591,265-3,592,090 | - | C1H3g12127 | CX3g028526 | LOC_Os03g08200 | Os03g0179700 | - | Detail |
| C2H3g12971 | 3:3,595,768-3,602,195 | + | C1H3g24405 | CX3g028986 | LOC_Os03g08220 | Os03g0179900 | - | Detail |
| C2H3g00189 | 3:3,603,042-3,604,961 | - | C1H3g02343 | CX3g028266 | LOC_Os03g08230 | Os03g0180000 | - | Detail |
| C2H3g00572 | 3:3,608,756-3,609,181 | - | C1H3g14063 | CX3g030311 | LOC_Os03g08250 | Os03g0180100 | - | Detail |
| C2H3g21163 | 3:3,611,996-3,618,782 | + | C1H3g29143 | CX3g029641 | LOC_Os03g08270 | Os03g0180300 | - | Detail |
| C2H3g26539 | 3:3,619,094-3,621,529 | - | C1H3g14724 | CX3g028474 | LOC_Os03g08280 | Os03g0180400 | OsPAA1 | Detail |
| C2H3g28919 | 3:3,624,791-3,625,757 | + | C1H3g22681 | CX3g030332 | LOC_Os03g08290 | Os03g0180600 | - | Detail |
| C2H3g14443 | 3:3,625,938-3,631,098 | - | C1H3g16812 | - | - | - | - | Detail |
| C2H3g02101 | 3:3,635,627-3,636,163 | - | C1H3g29454 | CX3g028990 | LOC_Os03g08310 | Os03g0180800 | TIFY11A, OsJAZ3, OsJAZ 9, OsJAZ9, OsTIFY11a, JAZ9 | Detail |
| C2H3g09847 | 3:3,642,120-3,643,481 | + | C1H3g20655 | CX3g028324 | LOC_Os03g08320 | Os03g0180900 | OsJAZ11 | Detail |
| C2H3g19227 | 3:3,650,465-3,651,049 | + | C1H3g10433 | CX3g026192 | LOC_Os03g08330 | Os03g0181100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |