| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g09039 | 12:19,631,892-19,633,186 | + | C2H12g09794 | CX12g018490 | LOC_Os12g39370 | Os12g0583400 | - | Detail |
| C1H12g23070 | 12:19,633,924-19,640,480 | - | C2H12g20780 | CX12g015825 | LOC_Os12g39380 | Os12g0583500 | - | Detail |
| C1H12g10572 | 12:19,651,876-19,652,610 | - | C2H12g12642 | CX12g015156 | LOC_Os12g39400 | Os12g0583700 | ZFP252 | Detail |
| C1H12g07000 | 12:19,671,747-19,677,745 | + | C2H12g23107 | CX12g015216 | LOC_Os12g39420 | Os12g0583900 | - | Detail |
| C1H12g00322 | 12:19,738,616-19,739,863 | - | C2H12g30647 | CX12g015552 | LOC_Os12g39520 | Os12g0585300 | - | Detail |
| C1H12g12387 | 12:19,813,634-19,817,455 | + | C2H12g27775 | CX12g017018 | LOC_Os12g39620 | Os12g0586000 | - | Detail |
| C1H12g12799 | 12:19,817,488-19,820,345 | - | C2H12g10823 | CX12g015394 | LOC_Os12g39630 | Os12g0586100 | SAPK9, OsSAPK9 | Detail |
| C1H12g10270 | 12:19,835,473-19,837,729 | + | C2H12g28434 | CX12g018031 | LOC_Os12g39640 | Os12g0586300 | GL12 | Detail |
| C1H12g09224 | 12:19,841,158-19,845,363 | + | C2H12g17655 | CX12g015816 | LOC_Os12g39650 | Os12g0586400 | - | Detail |
| C1H12g09125 | 12:19,847,910-19,853,615 | + | C2H12g17861 | CX12g015760 | LOC_Os12g39660 | Os12g0586600 | - | Detail |
| C1H12g15286 | 12:19,862,972-19,865,515 | - | C2H12g23085 | CX12g018806 | LOC_Os12g39830 | Os12g0588800 | - | Detail |
| C1H12g02422 | 12:19,870,499-19,873,563 | - | C2H12g11770 | CX12g017218 | LOC_Os12g39840 | Os12g0588900 | - | Detail |
| C1H12g17096 | 12:19,879,748-19,881,037 | - | C2H12g17897 | CX12g015266 | LOC_Os12g39850 | Os12g0589000 | - | Detail |
| C1H12g02999 | 12:19,884,364-19,887,123 | - | C2H12g10785 | CX12g016824 | LOC_Os12g39860 | Os12g0589100 | - | Detail |
| C1H12g30872 | 12:19,900,904-19,914,549 | - | C2H12g28784 | CX12g017316 | LOC_Os12g39980 | Os12g0590500 | - | Detail |
| C1H12g16823 | 12:19,940,877-19,943,597 | + | C2H12g29454 | CX12g015538 | LOC_Os12g40010 | Os12g0590900 | - | Detail |
| C1H12g31856 | 12:19,945,755-19,951,973 | + | C2H12g06167 | CX12g018693 | LOC_Os12g40070 | Os12g0591300 | - | Detail |
| C1H12g03293 | 12:19,954,690-19,956,241 | + | C2H12g30240 | CX12g018074 | LOC_Os12g40080 | Os12g0591500 | - | Detail |
| C1H12g01393 | 12:19,958,354-19,960,034 | + | C2H12g24797 | CX12g018074 | LOC_Os12g40090 | Os12g0592300 | - | Detail |
| C1H12g09353 | 12:19,963,028-19,967,438 | - | C2H12g28728 | CX12g018032 | LOC_Os12g40100 | Os12g0591600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g28226 | 4:25,141,928-25,144,517 | - | C1H4g09996 | - | LOC_Os04g49130 | Os04g0580400 | OsSCE3 | Detail |
| C2H4g09701 | 4:25,148,467-25,149,423 | - | - | CX4g035401 | LOC_Os04g49140 | Os04g0580500 | - | Detail |
| C2H4g28180 | 4:25,157,517-25,163,020 | + | C1H4g28417 | CX4g036099 | LOC_Os04g49150 | Os04g0580700 | MADS17, OsMADS17, NMADS3, RMADS213, nmads3 | Detail |
| C2H4g29841 | 4:25,165,360-25,165,848 | - | C1H4g23703 | CX4g031640 | LOC_Os04g49160 | Os04g0580800 | OsRFPH2-6 | Detail |
| C2H4g24583 | 4:25,170,519-25,171,040 | - | - | CX4g034669 | LOC_Os04g49170 | Os04g0580866 | - | Detail |
| C2H4g04279 | 4:25,172,890-25,175,528 | - | C1H8g13175 | CX4g033382 | LOC_Os06g36530 | - | - | Detail |
| C2H4g16797 | 4:25,186,392-25,187,121 | + | C1H4g30271 | CX4g035989 | LOC_Os04g49194 | Os04g0581000 | OsSAH2 | Detail |
| C2H4g02021 | 4:25,191,095-25,192,198 | + | C1H4g21644 | CX4g035989 | LOC_Os04g49194 | Os04g0581000 | OsSAH2 | Detail |
| C2H4g17595 | 4:25,193,950-25,195,360 | - | C1H4g27247 | CX4g034941 | LOC_Os04g49210 | Os04g0581100 | OsSAH3 | Detail |
| C2H4g22618 | 4:25,205,221-25,207,845 | - | C1H4g19809 | CX4g034701 | LOC_Os04g49220 | Os04g0581300 | - | Detail |
| C2H4g25213 | 4:25,221,044-25,222,318 | - | C1H4g15146 | CX4g035204 | LOC_Os04g49230 | Os04g0581400 | RAVL1 | Detail |
| C2H4g07246 | 4:25,264,468-25,264,665 | + | - | CX4g034172 | - | Os04g0581700 | - | Detail |
| C2H4g27357 | 4:25,266,514-25,267,024 | - | C1H4g26375 | CX4g036477 | LOC_Os04g49260 | Os04g0581800 | - | Detail |
| C2H4g21103 | 4:25,268,952-25,273,054 | - | C1H4g04071 | CX4g033493 | LOC_Os04g49270 | Os04g0582000 | OsDNA2_12 | Detail |
| C2H4g08363 | 4:25,274,439-25,278,081 | - | C1H4g14184 | CX4g033493 | LOC_Os04g49310 | Os04g0582600 | OsDNA2_13 | Detail |
| C2H4g08829 | 4:25,279,421-25,279,981 | - | C1H4g14184 | CX4g033493 | - | - | - | Detail |
| C2H4g18439 | 4:25,281,550-25,287,064 | - | C1H4g22667 | CX4g036138 | LOC_Os04g49320 | Os04g0582700 | OsDNA2_10 | Detail |
| C2H4g11122 | 4:25,288,555-25,288,861 | - | C1H4g13543 | CX4g033723 | LOC_Os04g49340 | Os04g0582900 | OsDNA2_11 | Detail |
| C2H4g27939 | 4:25,288,930-25,290,634 | - | C1H4g13543 | CX4g036138 | LOC_Os04g49340 | Os04g0582900 | OsDNA2_11 | Detail |
| C2H4g27086 | 4:25,293,122-25,293,784 | - | C1H4g24238 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |