| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g00369 | 12:19,354,620-19,360,581 | - | C2H12g06115 | CX12g015574 | LOC_Os12g38870 | Os12g0577800 | - | Detail |
| C1H12g31425 | 12:19,374,381-19,376,210 | - | C2H12g21149 | CX12g017526 | LOC_Os12g38880 | Os12g0578000 | - | Detail |
| C1H12g00225 | 12:19,376,915-19,378,194 | + | C2H12g11743 | CX12g015487 | - | Os12g0530100 | - | Detail |
| C1H12g07574 | 12:19,379,932-19,380,249 | + | C2H12g17013 | CX12g016002 | LOC_Os12g38900 | Os12g0578200 | - | Detail |
| C1H12g19103 | 12:19,381,720-19,385,408 | + | C2H12g17013 | CX12g016002 | LOC_Os12g38900 | Os12g0578200 | - | Detail |
| C1H12g25977 | 12:19,387,564-19,391,909 | + | C2H12g27102 | CX12g018018 | LOC_Os12g38910 | Os12g0578300 | - | Detail |
| C1H12g22422 | 12:19,392,439-19,396,688 | + | C2H12g06963 | CX12g017088 | LOC_Os12g38920 | Os12g0578400 | - | Detail |
| C1H12g15232 | 12:19,396,957-19,402,614 | - | C2H12g18495 | CX12g016623 | LOC_Os12g38930 | Os12g0578500 | - | Detail |
| C1H12g27740 | 12:19,406,048-19,407,130 | - | C2H12g09933 | CX12g015550 | LOC_Os12g38940 | Os12g0578600 | - | Detail |
| C1H12g14974 | 12:19,408,352-19,411,416 | - | C2H12g24390 | CX12g017948 | LOC_Os12g38950 | Os12g0578700 | - | Detail |
| C1H12g25491 | 12:19,412,610-19,414,410 | - | C2H12g12642 | CX12g015244 | LOC_Os12g38960 | Os12g0578800 | - | Detail |
| C1H12g15483 | 12:19,414,439-19,418,577 | - | C2H12g12388 | CX12g015244 | - | Os12g0578800 | - | Detail |
| C1H12g24155 | 12:19,419,502-19,427,043 | + | C2H12g19638 | CX12g015548 | LOC_Os12g38970 | Os12g0579000 | - | Detail |
| C1H12g27589 | 12:19,435,956-19,436,888 | + | C2H12g16465 | CX12g018664 | LOC_Os12g38990 | - | - | Detail |
| C1H12g05491 | 12:19,447,956-19,448,261 | - | - | - | - | - | - | Detail |
| C1H12g03006 | 12:19,470,952-19,475,441 | + | C2H12g28724 | CX12g016764 | LOC_Os12g39070 | Os12g0580300 | - | Detail |
| C1H12g30686 | 12:19,477,352-19,478,824 | + | C2H12g30550 | CX12g017525 | LOC_Os12g39080 | Os12g0580400 | OsPUT2 | Detail |
| C1H12g30608 | 12:19,482,872-19,485,160 | + | C2H12g19451 | CX12g016465 | LOC_Os12g39090 | Os12g0580500 | - | Detail |
| C1H12g26597 | 12:19,490,812-19,491,536 | + | C2H12g07749 | CX12g016924 | LOC_Os12g39100 | Os12g0580600 | - | Detail |
| C1H12g12444 | 12:19,496,723-19,499,216 | + | C2H12g07534 | CX12g017133 | LOC_Os12g39110 | Os12g0580700 | OsAIR4, OsAIR4.1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g22765 | 2:28,236,918-28,237,175 | - | C1H2g07594 | CX2g023200 | - | Os02g0736700 | - | Detail |
| C2H2g11611 | 2:28,240,281-28,240,817 | - | - | CX2g022254 | - | Os02g0736900 | - | Detail |
| C2H2g25731 | 2:28,245,225-28,245,455 | + | - | - | LOC_Os02g50400 | Os02g0737300 | - | Detail |
| C2H2g21919 | 2:28,251,181-28,251,420 | + | C1H2g14249 | - | LOC_Os02g50450 | Os02g0738100 | - | Detail |
| C2H2g10969 | 2:28,257,712-28,259,079 | - | C1H2g14103 | CX2g023707 | LOC_Os02g50460 | Os02g0738200 | - | Detail |
| C2H2g16308 | 2:28,277,648-28,283,562 | + | C1H2g00500 | CX2g021204 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| C2H2g12754 | 2:28,294,300-28,298,676 | + | C1H2g09387 | CX2g020936 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| C2H2g25440 | 2:28,300,139-28,310,024 | - | C1H2g28406 | CX2g022539 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| C2H2g10338 | 2:28,311,660-28,320,928 | + | C1H2g06055 | CX2g024755 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| C2H2g19070 | 2:28,320,855-28,325,288 | - | C1H2g22155 | CX2g024527 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| C2H2g12798 | 2:28,334,593-28,335,726 | - | C1H2g26267 | CX2g023617 | LOC_Os02g50600 | Os02g0739400 | - | Detail |
| C2H2g13279 | 2:28,345,355-28,349,094 | - | C1H2g19740 | CX2g023255 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| C2H2g20599 | 2:28,350,795-28,353,624 | - | C1H2g02446 | CX2g021394 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| C2H2g22496 | 2:28,356,473-28,360,636 | - | C1H2g01602 | CX2g023514 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| C2H2g07910 | 2:28,375,801-28,381,895 | - | C1H2g14498 | CX2g021304 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| C2H2g25866 | 2:28,382,669-28,384,104 | - | C1H2g26149 | CX2g024066 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| C2H2g26692 | 2:28,387,924-28,388,874 | + | C1H2g27425 | CX2g023069 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| C2H2g23006 | 2:28,390,599-28,390,880 | - | C1H2g04140 | CX2g024544 | LOC_Os02g50710 | Os02g0740600 | - | Detail |
| C2H2g13251 | 2:28,392,972-28,393,480 | + | - | - | - | - | - | Detail |
| C2H2g10045 | 2:28,393,015-28,394,133 | - | - | CX2g019920 | LOC_Os02g50730 | Os02g0740700 | OsMMP1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |