| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g01638 | 12:19,168,136-19,170,832 | + | C2H12g11112 | CX12g017446 | LOC_Os12g38560 | Os12g0573900 | - | Detail |
| C1H12g01733 | 12:19,185,194-19,188,492 | - | C2H12g14541 | CX12g018735 | LOC_Os12g38570 | Os12g0574000 | - | Detail |
| C1H12g11315 | 12:19,200,267-19,209,933 | + | C2H12g27516 | CX12g018184 | LOC_Os12g38590 | Os12g0574400 | - | Detail |
| C1H12g22967 | 12:19,210,943-19,213,015 | - | C2H12g29399 | CX12g016154 | LOC_Os12g38610 | Os12g0574700 | - | Detail |
| C1H12g27164 | 12:19,232,054-19,233,151 | - | C2H12g29632 | CX12g017251 | LOC_Os12g38620 | Os12g0574800 | - | Detail |
| C1H12g15350 | 12:19,233,737-19,238,689 | - | C2H12g21362 | CX12g018328 | LOC_Os12g38630 | Os12g0574900 | - | Detail |
| C1H12g09502 | 12:19,239,778-19,240,434 | - | C2H12g24789 | CX12g015885 | LOC_Os12g38640 | Os12g0575000 | - | Detail |
| C1H12g14366 | 12:19,241,010-19,241,175 | + | - | - | LOC_Os12g38650 | Os12g0575200 | - | Detail |
| C1H12g19934 | 12:19,245,063-19,245,371 | - | C2H12g10258 | CX12g017838 | LOC_Os12g38720 | Os12g0575300 | - | Detail |
| C1H12g12899 | 12:19,256,388-19,259,259 | - | C2H12g00857 | CX12g015511 | LOC_Os12g38730 | Os12g0576300 | - | Detail |
| C1H12g10259 | 12:19,262,646-19,271,551 | - | C2H12g17120 | CX12g016341 | LOC_Os12g38750 | Os12g0576600 | - | Detail |
| C1H12g21793 | 12:19,283,944-19,287,697 | - | C2H12g04894 | CX12g017028 | LOC_Os12g38760 | Os12g0576700 | - | Detail |
| C1H12g30700 | 12:19,289,763-19,292,909 | - | C2H12g26878 | CX12g016600 | LOC_Os12g38770 | Os12g0576750 | PAP1B, OsPAP1b, NPP2, OsNPP2 | Detail |
| C1H12g05519 | 12:19,294,226-19,300,697 | - | C2H12g26810 | CX12g017595 | LOC_Os12g38780 | Os12g0576900 | - | Detail |
| C1H12g22000 | 12:19,303,109-19,305,330 | + | C2H12g06238 | CX12g017201 | LOC_Os12g38790 | Os12g0577000 | - | Detail |
| C1H12g15638 | 12:19,306,400-19,314,241 | + | C2H12g22098 | CX12g016939 | LOC_Os12g38800 | Os12g0577100 | - | Detail |
| C1H12g30406 | 12:19,320,157-19,321,197 | + | C2H12g08874 | CX12g017608 | LOC_Os12g38810 | Os12g0577200 | - | Detail |
| C1H12g21439 | 12:19,341,758-19,346,886 | + | C2H12g22738 | CX12g015208 | LOC_Os12g38850 | Os12g0577600 | - | Detail |
| C1H12g00519 | 12:19,348,331-19,350,779 | - | C2H12g29158 | CX12g018076 | LOC_Os12g38860 | Os12g0577700 | - | Detail |
| C1H12g23780 | 12:19,350,096-19,354,822 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g20622 | 2:28,393,493-28,394,206 | + | - | - | - | - | - | Detail |
| C2H2g24045 | 2:28,398,786-28,400,066 | + | C1H2g10719 | CX2g019676 | LOC_Os02g50740 | Os02g0740900 | - | Detail |
| C2H2g20295 | 2:28,402,691-28,406,400 | + | C1H2g20437 | CX2g020505 | LOC_Os02g50760 | Os02g0741100 | - | Detail |
| C2H2g15348 | 2:28,408,000-28,409,280 | + | C1H2g19755 | CX2g019362 | LOC_Os02g50770 | Os02g0741200 | - | Detail |
| C2H2g20379 | 2:28,411,430-28,416,254 | + | C1H2g04090 | CX2g020607 | LOC_Os02g50780 | Os02g0741300 | - | Detail |
| C2H2g26992 | 2:28,416,726-28,441,598 | - | C1H2g03541 | CX2g021407 | LOC_Os02g50790 | Os02g0741500 | OsTPR | Detail |
| C2H2g19262 | 2:28,445,324-28,446,582 | - | C1H2g24228 | CX2g020349 | LOC_Os02g50810 | Os02g0741700 | - | Detail |
| C2H2g17447 | 2:28,453,359-28,459,040 | - | C1H2g00929 | CX2g020325 | LOC_Os02g50820 | Os02g0741800 | - | Detail |
| C2H2g23000 | 2:28,461,770-28,465,935 | - | C1H2g07670 | CX2g020330 | LOC_Os02g50830 | Os02g0741900 | - | Detail |
| C2H2g04510 | 2:28,468,713-28,475,939 | + | C1H2g09428 | CX2g024454 | LOC_Os02g50840 | Os02g0742000 | - | Detail |
| C2H2g05271 | 2:28,480,866-28,488,123 | + | C1H2g30208 | CX2g022406 | LOC_Os02g50850 | Os02g0742100 | - | Detail |
| C2H2g03132 | 2:28,488,881-28,492,529 | - | C1H2g09499 | CX2g022780 | LOC_Os02g50860 | Os02g0742200 | - | Detail |
| C2H2g30575 | 2:28,503,140-28,503,778 | + | - | - | - | - | - | Detail |
| C2H2g26581 | 2:28,503,874-28,508,024 | - | C1H2g30786 | CX2g022158 | LOC_Os02g50880 | Os02g0742500 | - | Detail |
| C2H2g27845 | 2:28,518,374-28,520,904 | + | C1H2g10416 | CX2g019943 | LOC_Os02g50900 | Os02g0742700 | - | Detail |
| C2H2g13391 | 2:28,528,045-28,536,569 | - | C1H2g03421 | CX2g023679 | LOC_Os02g50910 | Os02g0742900 | - | Detail |
| C2H2g14912 | 2:28,539,227-28,542,228 | - | - | CX2g020446 | LOC_Os03g37780 | Os03g0574300 | - | Detail |
| C2H2g18301 | 2:28,546,358-28,547,548 | + | C1H2g26730 | CX2g022235 | LOC_Os02g50930 | Os02g0743100 | OsBIRF1 | Detail |
| C2H2g30022 | 2:28,550,889-28,551,395 | - | C1H6g24258 | CX2g021784 | LOC_Os02g50940 | Os02g0743200 | - | Detail |
| C2H2g19696 | 2:28,564,063-28,567,187 | - | C1H2g16987 | CX2g020591 | LOC_Os02g50960 | Os02g0743400 | OsPIN1b, REH1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |