| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g22227 | 12:19,013,370-19,015,541 | + | C2H12g13163 | CX12g017124 | LOC_Os12g38290 | Os12g0571000 | - | Detail |
| C1H12g10209 | 12:19,019,795-19,020,427 | + | C2H12g18304 | CX12g017124 | LOC_Os12g38290 | Os12g0571100 | MTI4C, MT-1-4b, OsMT1d, OsMT-I-4c | Detail |
| C1H12g31880 | 12:19,021,391-19,022,856 | + | C2H12g08353 | CX12g018738 | LOC_Os12g38310 | Os12g0571200 | - | Detail |
| C1H12g16299 | 12:19,024,822-19,025,577 | - | C2H12g09891 | CX12g015965 | LOC_Os12g38320 | Os12g0571300 | - | Detail |
| C1H12g29524 | 12:19,032,902-19,034,722 | - | C2H12g06418 | CX12g015646 | - | - | - | Detail |
| C1H12g07155 | 12:19,036,329-19,036,799 | + | - | - | - | - | - | Detail |
| C1H12g00013 | 12:19,040,147-19,040,548 | + | C2H12g12045 | CX12g018241 | LOC_Os12g38340 | Os12g0571500 | - | Detail |
| C1H12g14796 | 12:19,044,744-19,045,250 | + | C2H12g22265 | CX12g017618 | LOC_Os12g38350 | Os12g0571600 | - | Detail |
| C1H12g13878 | 12:19,046,801-19,047,160 | + | C2H12g04558 | CX12g017487 | LOC_Os12g38360 | Os12g0571700 | - | Detail |
| C1H12g00437 | 12:19,060,763-19,070,100 | + | C2H12g02202 | CX12g016737 | LOC_Os12g38380 | Os12g0571900 | - | Detail |
| C1H12g23941 | 12:19,070,769-19,075,997 | - | C2H12g06609 | CX12g017311 | LOC_Os12g38400 | Os12g0572000 | OsMYB91, OsRS2 | Detail |
| C1H12g06117 | 12:19,100,585-19,103,094 | - | C2H12g27486 | CX12g015286 | LOC_Os12g38430 | Os12g0572400 | - | Detail |
| C1H12g07709 | 12:19,106,718-19,111,044 | + | C2H12g21889 | CX12g015465 | LOC_Os12g38440 | Os12g0572500 | - | Detail |
| C1H12g05641 | 12:19,112,586-19,114,684 | + | C2H12g24384 | CX12g018435 | LOC_Os12g38440 | Os12g0572500 | - | Detail |
| C1H12g27935 | 12:19,116,398-19,118,041 | + | C2H12g00949 | CX12g018261 | LOC_Os12g38450 | Os12g0572700 | OsGT47A-VII | Detail |
| C1H12g25184 | 12:19,118,323-19,121,729 | - | C2H12g28145 | CX12g018183 | LOC_Os12g38460 | Os12g0572800 | MEL2 | Detail |
| C1H12g23166 | 12:19,121,765-19,125,233 | - | C2H12g28556 | CX12g018183 | LOC_Os12g38460 | Os12g0572800 | MEL2 | Detail |
| C1H12g11078 | 12:19,131,936-19,133,967 | + | C2H12g20492 | CX12g018587 | LOC_Os12g38480 | Os12g0573000 | - | Detail |
| C1H12g22011 | 12:19,151,194-19,153,413 | + | C2H12g06837 | CX12g016564 | LOC_Os12g38490 | Os12g0573200 | - | Detail |
| C1H12g16046 | 12:19,167,191-19,167,379 | + | C2H12g24752 | CX12g015038 | - | Os12g0573600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g22632 | 5:17,074,215-17,074,625 | - | - | - | - | Os05g0436700 | - | Detail |
| C2H5g18531 | 5:17,083,688-17,087,095 | + | C1H5g29101 | CX5g040178 | LOC_Os05g34220 | Os05g0414200 | - | Detail |
| C2H5g09968 | 5:17,089,047-17,091,116 | - | C1H5g28207 | CX5g041020 | LOC_Os05g34230 | Os05g0414300 | - | Detail |
| C2H5g22407 | 5:17,092,438-17,095,797 | - | C1H5g30847 | CX5g040102 | LOC_Os05g34240 | Os05g0414400 | - | Detail |
| C2H5g11810 | 5:17,098,704-17,101,082 | - | C1H5g05782 | CX5g039340 | LOC_Os05g34260 | Os05g0414501 | - | Detail |
| C2H5g23251 | 5:17,103,540-17,107,066 | - | C1H5g25050 | CX5g040264 | LOC_Os05g34270 | Os05g0414700 | - | Detail |
| C2H5g21994 | 5:17,117,086-17,120,453 | + | C1H5g10718 | CX5g036908 | LOC_Os05g34290 | Os05g0415200 | OsPCS1, PCS1 | Detail |
| C2H5g03155 | 5:17,126,832-17,128,223 | - | C1H5g30603 | CX5g038965 | LOC_Os05g34310 | Os05g0415400 | OsNAC24 | Detail |
| C2H5g01672 | 5:17,135,863-17,141,335 | + | C1H5g05650 | CX5g036727 | LOC_Os05g34320 | Os05g0415700 | - | Detail |
| C2H5g12355 | 5:17,146,454-17,148,748 | + | C1H5g12868 | CX5g039800 | LOC_Os05g34325 | Os05g0415800 | SDF5 | Detail |
| C2H5g04891 | 5:17,158,380-17,161,330 | + | C1H5g18533 | CX5g040810 | LOC_Os05g34330 | Os05g0415900 | - | Detail |
| C2H5g21297 | 5:17,169,088-17,172,562 | + | C1H5g15900 | CX5g040810 | LOC_Os05g34380 | Os05g0416400 | - | Detail |
| C2H5g12818 | 5:17,185,247-17,190,085 | - | C1H5g01316 | CX5g039838 | LOC_Os05g34450 | Os05g0417000 | - | Detail |
| C2H5g07004 | 5:17,204,966-17,210,552 | + | C1H5g11798 | CX5g038947 | LOC_Os05g34460 | Os05g0417100 | OsDeg10, OsDegP7, TCM5 | Detail |
| C2H5g04759 | 5:17,211,253-17,212,680 | + | C1H5g00545 | CX5g039768 | LOC_Os05g34470 | Os05g0417200 | - | Detail |
| C2H5g08539 | 5:17,216,859-17,219,622 | + | C1H5g02957 | CX5g036958 | LOC_Os05g34480 | Os05g0417300 | - | Detail |
| C2H5g04823 | 5:17,226,063-17,226,413 | + | C1H5g23511 | CX5g039968 | LOC_Os05g34500 | Os05g0417600 | - | Detail |
| C2H5g22148 | 5:17,227,910-17,228,227 | + | C1H5g30645 | CX5g037235 | LOC_Os05g34510 | Os05g0417700 | - | Detail |
| C2H5g07813 | 5:17,233,950-17,234,261 | - | C1H5g05293 | CX5g037225 | LOC_Os05g34530 | Os05g0417900 | - | Detail |
| C2H5g11479 | 5:17,240,999-17,246,293 | + | C1H5g17144 | CX5g039245 | LOC_Os05g34540 | Os05g0418000 | OsGDI1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |