| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g03020 | 12:18,711,178-18,715,933 | - | C2H12g21743 | CX12g017177 | LOC_Os12g37740 | Os12g0564800 | Pijx | Detail |
| C1H12g20951 | 12:18,717,603-18,717,788 | - | C2H12g03104 | - | - | - | - | Detail |
| C1H12g08134 | 12:18,718,041-18,719,051 | + | C2H12g05639 | CX12g017162 | LOC_Os12g37750 | Os12g0565000 | - | Detail |
| C1H12g19073 | 12:18,719,086-18,721,085 | + | C2H12g05838 | CX12g017162 | LOC_Os12g37750 | Os12g0589400 | HSA1a, HSA1a-j | Detail |
| C1H12g28772 | 12:18,727,899-18,733,647 | + | C2H12g00801 | CX12g017607 | LOC_Os12g37770 | Os12g0565200 | - | Detail |
| C1H12g23639 | 12:18,739,654-18,740,493 | + | C2H12g00801 | CX12g017607 | LOC_Os12g37770 | Os12g0565200 | - | Detail |
| C1H12g05537 | 12:18,740,899-18,745,201 | - | C2H12g17933 | CX12g016058 | LOC_Os12g37780 | Os12g0565300 | - | Detail |
| C1H12g28343 | 12:18,758,940-18,762,350 | + | C2H12g19909 | CX12g018715 | LOC_Os12g37830 | - | - | Detail |
| C1H12g19479 | 12:18,778,009-18,782,691 | + | C2H12g20757 | CX12g016748 | LOC_Os12g37840 | Os12g0566000 | - | Detail |
| C1H12g30349 | 12:18,785,492-18,787,554 | - | C2H12g10606 | CX12g015842 | LOC_Os12g37850 | Os12g0566100 | - | Detail |
| C1H12g24725 | 12:18,791,406-18,799,854 | + | C2H12g09792 | CX12g016396 | LOC_Os12g37860 | Os12g0566200 | OsMOS1 | Detail |
| C1H12g27221 | 12:18,801,904-18,805,814 | + | C2H12g16443 | CX12g018274 | LOC_Os12g37870 | Os12g0566300 | OsACL-A2, SPL30 | Detail |
| C1H12g06981 | 12:18,807,785-18,810,110 | + | C2H12g07524 | CX12g015726 | LOC_Os12g37880 | Os12g0566400 | - | Detail |
| C1H12g19310 | 12:18,811,531-18,820,372 | + | C2H12g28239 | CX12g016486 | LOC_Os12g37890 | Os12g0566500 | - | Detail |
| C1H12g31629 | 12:18,821,335-18,821,733 | + | C2H12g15187 | CX12g016139 | LOC_Os12g37900 | Os12g0566600 | - | Detail |
| C1H12g27584 | 12:18,822,585-18,827,014 | - | C2H12g00556 | CX12g018002 | LOC_Os12g37910 | Os12g0566700 | - | Detail |
| C1H12g23420 | 12:18,830,381-18,833,920 | - | C2H12g19027 | CX12g017283 | LOC_Os12g37939 | Os12g0566800 | - | Detail |
| C1H12g27861 | 12:18,834,976-18,844,346 | - | C2H12g24170 | CX12g017681 | LOC_Os12g37939 | Os12g0566900 | - | Detail |
| C1H12g25945 | 12:18,846,714-18,851,977 | + | C2H12g14640 | CX12g015677 | LOC_Os12g37960 | - | - | Detail |
| C1H12g02492 | 12:18,854,362-18,855,307 | - | C2H12g13529 | CX12g017026 | LOC_Os12g37970 | Os12g0567300 | Os2R_MYB98 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20866 | 4:26,990,086-26,990,352 | + | C1H4g28262 | CX4g034575 | LOC_Os04g52750 | Os04g0618400 | - | Detail |
| C2H4g09538 | 4:26,991,360-26,995,438 | - | C1H4g01403 | CX4g035558 | LOC_Os04g52760 | Os04g0618500 | - | Detail |
| C2H4g06850 | 4:26,997,594-26,998,676 | + | C1H4g16234 | CX4g034460 | LOC_Os04g52770 | Os04g0618600 | PIF1 | Detail |
| C2H4g10397 | 4:26,999,867-27,004,023 | - | C1H4g28199 | CX4g034704 | LOC_Os04g52780 | Os04g0618700 | OsFLS2 | Detail |
| C2H4g19624 | 4:27,013,456-27,014,478 | - | - | - | LOC_Os04g52800 | Os04g0618950 | - | Detail |
| C2H4g00816 | 4:27,019,472-27,022,555 | - | C1H4g22303 | CX4g036144 | LOC_Os04g52810 | Os04g0619000 | ONAC083 | Detail |
| C2H4g22466 | 4:27,026,632-27,028,484 | + | - | CX4g034825 | - | - | - | Detail |
| C2H4g08987 | 4:27,028,967-27,029,331 | + | C1H4g06933 | CX4g032452 | - | - | - | Detail |
| C2H4g28780 | 4:27,037,962-27,041,128 | + | C1H4g18636 | CX4g031427 | LOC_Os04g52830 | Os04g0619300 | Ctb1 | Detail |
| C2H4g02197 | 4:27,042,195-27,045,554 | - | C1H4g13931 | CX4g035196 | LOC_Os04g52840 | Os04g0619400 | OsRLCK160 | Detail |
| C2H4g23444 | 4:27,051,632-27,054,535 | + | C1H4g15202 | CX4g033062 | LOC_Os04g52850 | Os04g0619500 | - | Detail |
| C2H4g18841 | 4:27,056,658-27,059,192 | - | C1H4g24641 | CX4g033748 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| C2H4g25907 | 4:27,063,020-27,066,257 | - | C1H4g04907 | - | - | - | - | Detail |
| C2H4g02631 | 4:27,069,306-27,070,566 | + | - | - | LOC_Os04g52880 | Os04g0619800 | - | Detail |
| C2H4g06612 | 4:27,079,390-27,084,156 | + | C1H4g18235 | CX4g036286 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| C2H4g03746 | 4:27,084,868-27,097,303 | - | C1H4g18046 | CX4g032062 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| C2H4g26107 | 4:27,101,123-27,101,539 | - | - | - | LOC_Os04g52910 | - | - | Detail |
| C2H4g21419 | 4:27,104,775-27,105,700 | + | - | - | - | - | - | Detail |
| C2H4g02835 | 4:27,106,476-27,108,281 | + | C1H4g11396 | CX4g031475 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| C2H4g19928 | 4:27,114,110-27,124,400 | + | C1H4g24139 | CX4g032286 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |