| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27189 | 12:17,903,901-17,904,173 | - | C2H12g13321 | CX12g017911 | LOC_Os12g36490 | Os12g0551200 | - | Detail |
| C1H12g03214 | 12:17,938,154-17,945,109 | + | C2H12g02214 | CX12g016040 | LOC_Os12g36580 | Os12g0551900 | - | Detail |
| C1H12g00609 | 12:17,988,532-17,999,337 | + | C2H12g13321 | CX12g017911 | LOC_Os12g36340 | Os12g0549800 | - | Detail |
| C1H12g03618 | 12:18,018,088-18,020,312 | + | C2H12g04025 | CX12g016889 | LOC_Os12g36610 | Os12g0552200 | - | Detail |
| C1H12g13279 | 12:18,063,693-18,066,452 | - | C2H12g26461 | CX12g015365 | LOC_Os12g36620 | Os12g0552300 | PPS1 | Detail |
| C1H12g23815 | 12:18,068,060-18,068,720 | - | C2H12g03198 | CX12g016909 | LOC_Os12g36630 | Os12g0552400 | - | Detail |
| C1H12g27529 | 12:18,069,122-18,071,644 | - | C2H12g05175 | CX12g016909 | LOC_Os12g36640 | Os12g0552500 | - | Detail |
| C1H12g15786 | 12:18,089,124-18,090,738 | + | C2H12g12611 | CX12g015364 | LOC_Os12g36660 | Os12g0552600 | TGW12a, qTGW12a | Detail |
| C1H12g29275 | 12:18,100,749-18,104,873 | + | C2H12g05930 | CX12g016435 | LOC_Os12g36670 | Os12g0552700 | - | Detail |
| C1H12g24562 | 12:18,109,426-18,111,771 | + | C2H12g03052 | CX12g015172 | LOC_Os12g36680 | Os12g0552800 | - | Detail |
| C1H12g03146 | 12:18,116,869-18,120,030 | - | C2H12g02154 | CX12g018213 | LOC_Os12g36720 | Os12g0553600 | - | Detail |
| C1H12g00321 | 12:18,121,396-18,122,450 | + | - | - | - | Os12g0553050 | - | Detail |
| C1H12g09573 | 12:18,124,970-18,125,630 | + | - | - | - | Os12g0553050 | - | Detail |
| C1H12g15410 | 12:18,131,304-18,131,816 | - | C2H12g02154 | CX12g018213 | LOC_Os12g36690 | Os12g0552900 | - | Detail |
| C1H12g01930 | 12:18,134,352-18,135,125 | + | C2H12g06633 | CX12g016931 | - | - | - | Detail |
| C1H12g28608 | 12:18,138,385-18,140,552 | + | - | - | - | - | - | Detail |
| C1H12g05813 | 12:18,148,764-18,151,316 | + | C2H12g27584 | - | LOC_Os12g36740 | Os12g0516700 | - | Detail |
| C1H12g04068 | 12:18,153,417-18,156,135 | - | C2H12g15252 | CX12g015515 | LOC_Os12g36750 | Os12g0554100 | - | Detail |
| C1H12g01446 | 12:18,161,089-18,171,130 | - | C2H12g14585 | CX12g016097 | LOC_Os12g36760 | Os12g0554400 | - | Detail |
| C1H12g23720 | 12:18,172,596-18,177,138 | - | C2H12g15590 | CX12g016599 | LOC_Os12g36770 | Os12g0554500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g16390 | 6:3,252,109-3,268,767 | - | C1H6g28905 | CX6g042053 | LOC_Os06g08380 | Os06g0182300 | GSL5, OsGSL5 | Detail |
| C2H6g02045 | 6:3,271,911-3,276,116 | + | C1H6g20285 | CX6g041705 | LOC_Os06g08390 | - | - | Detail |
| C2H6g17246 | 6:3,277,364-3,285,254 | + | C1H6g18809 | CX6g042466 | LOC_Os06g08400 | Os06g0182500 | - | Detail |
| C2H6g25998 | 6:3,294,069-3,294,383 | - | C1H6g30036 | - | - | - | - | Detail |
| C2H6g09876 | 6:3,319,719-3,323,508 | + | C1H6g06067 | CX6g042952 | LOC_Os06g08550 | Os06g0184500 | OsNPY2 | Detail |
| C2H6g09197 | 6:3,328,441-3,332,856 | - | C1H6g08815 | CX6g043855 | LOC_Os06g08730 | Os06g0186500 | - | Detail |
| C2H6g26593 | 6:3,340,733-3,346,861 | + | C1H6g03621 | CX6g043949 | LOC_Os06g08720 | Os06g0186400 | - | Detail |
| C2H6g15979 | 6:3,350,815-3,354,306 | + | C1H6g04589 | CX6g044426 | LOC_Os06g08710 | Os06g0186300 | - | Detail |
| C2H6g28335 | 6:3,375,421-3,380,754 | + | C1H6g29216 | CX6g043481 | LOC_Os06g08440 | Os06g0183100 | ORR2, ORR2, B-type RR | Detail |
| C2H6g18941 | 6:3,380,961-3,388,251 | - | C1H6g11123 | CX6g041664 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C2H6g17086 | 6:3,393,570-3,395,054 | + | C1H6g14213 | CX6g044750 | LOC_Os06g08460 | Os06g0183600 | - | Detail |
| C2H6g26636 | 6:3,395,818-3,399,180 | - | C1H6g00515 | CX6g043120 | LOC_Os06g08470 | Os06g0183700 | - | Detail |
| C2H6g26382 | 6:3,399,457-3,416,201 | - | C1H6g09185 | CX6g043183 | LOC_Os06g08480 | Os06g0183800 | OsCHR702, CHR702 | Detail |
| C2H6g23757 | 6:3,421,711-3,422,763 | - | - | CX6g044993 | LOC_Os06g08490 | Os06g0183900 | - | Detail |
| C2H6g18991 | 6:3,425,422-3,427,727 | - | C1H6g27595 | CX6g041255 | LOC_Os06g08500 | Os06g0184000 | OsRHL1 | Detail |
| C2H6g17059 | 6:3,433,660-3,434,220 | - | C1H6g21452 | CX6g042954 | LOC_Os06g08510 | Os06g0184100 | DPL2 | Detail |
| C2H6g17339 | 6:3,438,154-3,439,624 | - | C1H6g01823 | CX6g043502 | LOC_Os06g08520 | Os06g0184200 | - | Detail |
| C2H6g05817 | 6:3,447,165-3,452,264 | - | C1H6g09856 | CX6g045722 | LOC_Os06g08530 | Os06g0184300 | - | Detail |
| C2H6g11053 | 6:3,454,823-3,460,982 | + | C1H6g07584 | CX6g042782 | LOC_Os06g08540 | Os06g0184400 | - | Detail |
| C2H6g21573 | 6:3,462,352-3,466,661 | - | C1H6g06067 | CX6g042952 | LOC_Os06g08550 | Os06g0184500 | OsNPY2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |