| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g13031 | 12:17,091,689-17,092,712 | + | C2H12g21547 | CX12g018804 | LOC_Os12g33230 | Os12g0517100 | - | Detail |
| C1H12g09087 | 12:17,098,348-17,098,686 | + | C2H12g24039 | CX12g015986 | LOC_Os12g33240 | Os12g0517200 | - | Detail |
| C1H12g10574 | 12:17,101,194-17,103,928 | + | C2H12g22503 | CX12g017136 | LOC_Os12g33270 | Os12g0527500 | - | Detail |
| C1H12g08829 | 12:17,153,641-17,156,701 | + | C2H12g23119 | CX12g017792 | LOC_Os12g33270 | Os12g0527500 | - | Detail |
| C1H12g23668 | 12:17,165,407-17,171,178 | + | C2H12g08279 | CX12g016074 | LOC_Os12g34320 | Os12g0527700 | SDRLK-10 | Detail |
| C1H12g10121 | 12:17,172,157-17,179,600 | - | C2H12g18063 | CX12g016434 | LOC_Os12g34330 | Os12g0527800 | - | Detail |
| C1H12g16370 | 12:17,180,149-17,181,784 | + | C2H12g27770 | CX12g017551 | LOC_Os12g34340 | Os12g0527900 | - | Detail |
| C1H12g27316 | 12:17,182,645-17,187,010 | - | C2H12g02414 | CX12g017098 | LOC_Os12g34350 | Os12g0528000 | - | Detail |
| C1H12g03418 | 12:17,193,401-17,195,866 | + | C2H12g08556 | CX12g018233 | LOC_Os12g34360 | Os12g0528100 | - | Detail |
| C1H12g05978 | 12:17,197,488-17,202,562 | + | C2H12g08360 | CX12g016339 | LOC_Os12g34370 | Os12g0528300 | - | Detail |
| C1H12g25982 | 12:17,202,952-17,207,744 | + | C2H12g11104 | CX12g017447 | LOC_Os12g34380 | Os12g0528400 | OsGS3 | Detail |
| C1H12g23950 | 12:17,208,790-17,211,299 | - | C2H12g22976 | CX12g017795 | - | Os12g0528801 | - | Detail |
| C1H12g08305 | 12:17,227,077-17,229,804 | + | C2H12g09991 | CX12g016328 | LOC_Os12g34440 | Os12g0529200 | - | Detail |
| C1H12g22186 | 12:17,233,871-17,235,027 | + | C2H12g16177 | CX12g016537 | LOC_Os12g34450 | Os12g0529300 | - | Detail |
| C1H12g26621 | 12:17,235,531-17,237,237 | + | C2H12g29871 | CX12g016869 | LOC_Os12g34450 | Os12g0529400 | - | Detail |
| C1H12g27262 | 12:17,249,641-17,251,170 | + | C2H12g25546 | CX12g015285 | LOC_Os12g34500 | Os12g0529900 | - | Detail |
| C1H12g02312 | 12:17,253,411-17,253,922 | - | C2H12g21736 | CX12g016676 | LOC_Os12g34510 | Os12g0530000 | - | Detail |
| C1H12g01928 | 12:17,255,017-17,261,670 | - | C2H12g27108 | CX12g015313 | LOC_Os12g34524 | Os12g0530100 | - | Detail |
| C1H12g06755 | 12:17,312,944-17,315,765 | + | C2H12g30263 | CX12g018073 | LOC_Os12g34840 | Os12g0533400 | - | Detail |
| C1H12g14770 | 12:17,316,132-17,322,373 | - | C2H12g18128 | CX12g018318 | LOC_Os12g34850 | Os12g0533500 | OsVIL1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06482 | 2:29,371,707-29,373,467 | + | C1H2g24237 | CX2g020266 | LOC_Os02g52480 | Os02g0762400 | KRP1, OsiICK1, Orysa;KRP1, OrysaICK1, Orysa;ICK1, CDKI | Detail |
| C2H2g14994 | 2:29,379,968-29,380,435 | - | - | CX2g020064 | LOC_Os02g52490 | Os02g0762600 | SGL1 | Detail |
| C2H2g29446 | 2:29,385,573-29,394,313 | - | C1H2g04159 | CX2g022518 | LOC_Os02g52510 | Os02g0762800 | OsRad54 | Detail |
| C2H2g01751 | 2:29,397,002-29,397,304 | - | - | CX2g023245 | LOC_Os02g52540 | - | - | Detail |
| C2H2g11954 | 2:29,401,275-29,402,154 | + | C1H2g10187 | CX2g023141 | LOC_Os02g52550 | Os02g0763000 | OsCNR1, TGW2, OsFWL1 | Detail |
| C2H2g00538 | 2:29,415,549-29,416,080 | + | C1H2g21759 | - | - | - | - | Detail |
| C2H2g18956 | 2:29,419,129-29,422,357 | + | C1H2g09761 | CX2g024148 | LOC_Os02g52560 | Os02g0763200 | - | Detail |
| C2H2g03175 | 2:29,423,273-29,426,274 | + | C1H2g15844 | CX2g024148 | LOC_Os02g52590 | Os02g0763800 | - | Detail |
| C2H2g23310 | 2:29,426,521-29,426,997 | + | C1H2g15324 | - | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C2H2g02605 | 2:29,429,194-29,432,334 | + | C1H2g26295 | CX2g023343 | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C2H2g18172 | 2:29,435,564-29,438,153 | + | C1H2g14291 | CX2g019855 | LOC_Os02g52630 | Os02g0764200 | - | Detail |
| C2H2g07475 | 2:29,442,236-29,444,534 | + | C1H2g16896 | CX2g023343 | LOC_Os02g52640 | Os02g0764400 | - | Detail |
| C2H2g26785 | 2:29,444,959-29,446,785 | - | C1H2g16728 | CX2g022219 | LOC_Os02g52650 | Os02g0764500 | - | Detail |
| C2H2g22917 | 2:29,448,988-29,449,743 | - | C1H2g23870 | CX2g021656 | LOC_Os02g52670 | Os02g0764700 | OsERF103 | Detail |
| C2H2g26543 | 2:29,462,389-29,463,967 | + | C1H2g10581 | CX2g018991 | LOC_Os02g52700 | Os02g0765400 | Amy1C | Detail |
| C2H2g29404 | 2:29,466,319-29,467,913 | - | C1H2g08973 | CX2g021489 | LOC_Os02g52710 | Os02g0765600 | AMY1A, Amy1A/C*(RAmy1A/C), alpha Amy7, AMY1.1, Amy1A, RAmy1A/C, Amy1A/C*, Amy1, Amy1A_C, OsAmy1A, alphaAmy7-C, RAmy1A | Detail |
| C2H2g24763 | 2:29,471,454-29,472,131 | - | C1H2g26635 | CX2g019501 | LOC_Os02g52720 | Os02g0765800 | - | Detail |
| C2H2g20003 | 2:29,474,844-29,478,669 | - | C1H2g13987 | CX2g022397 | LOC_Os02g52744 | Os02g0766000 | - | Detail |
| C2H2g16702 | 2:29,485,155-29,485,984 | + | C1H2g23770 | CX2g019269 | LOC_Os02g52770 | Os02g0766600 | - | Detail |
| C2H2g14916 | 2:29,487,761-29,492,896 | - | C1H2g16420 | CX2g021391 | LOC_Os02g52780 | Os02g0766700 | BZIP23, OsbZIP23, OsAREB1, OsABF2, Osbzip23, OsAREB2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |