| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g14223 | 12:16,654,510-16,655,973 | + | C2H12g16950 | CX12g017413 | LOC_Os12g32380 | Os12g0508300 | - | Detail |
| C1H12g04208 | 12:16,664,823-16,667,718 | + | C2H12g15579 | CX12g015589 | LOC_Os12g32390 | Os12g0508400 | - | Detail |
| C1H12g20034 | 12:16,670,612-16,671,628 | + | C2H12g17897 | CX12g015589 | LOC_Os12g32400 | Os12g0508500 | OsbHLH133 | Detail |
| C1H12g01026 | 12:16,674,395-16,674,772 | - | C2H12g05290 | CX12g016543 | - | - | - | Detail |
| C1H12g18134 | 12:16,699,662-16,701,889 | - | C2H12g28152 | - | LOC_Os12g32580 | - | - | Detail |
| C1H12g03703 | 12:16,707,990-16,709,113 | + | C2H12g26520 | CX12g016850 | - | - | - | Detail |
| C1H12g21922 | 12:16,717,076-16,717,663 | - | C2H12g14514 | CX12g017324 | LOC_Os12g32610 | Os12g0510750 | OsSMP2 | Detail |
| C1H12g07006 | 12:16,724,311-16,726,237 | + | C2H12g23023 | CX12g017638 | LOC_Os12g32620 | Os12g0510900 | - | Detail |
| C1H12g03851 | 12:16,728,882-16,731,557 | - | C2H12g01778 | CX12g016065 | LOC_Os12g32630 | Os12g0511000 | - | Detail |
| C1H12g10988 | 12:16,735,500-16,738,577 | + | C2H12g29019 | CX12g017408 | LOC_Os12g32640 | Os12g0511200 | - | Detail |
| C1H12g02725 | 12:16,740,629-16,743,267 | + | C2H12g27722 | CX12g016554 | LOC_Os12g32650 | Os12g0511300 | - | Detail |
| C1H12g25225 | 12:16,744,410-16,749,593 | - | C2H12g10634 | CX12g015393 | LOC_Os12g32660 | Os12g0511400 | - | Detail |
| C1H12g13852 | 12:16,765,611-16,766,183 | + | - | - | - | - | - | Detail |
| C1H12g00024 | 12:16,767,555-16,771,769 | - | C2H12g02344 | CX12g015919 | LOC_Os12g32670 | Os12g0511500 | - | Detail |
| C1H12g02230 | 12:16,796,008-16,803,454 | + | C2H12g11130 | CX12g015792 | LOC_Os12g32750 | Os12g0512000 | YUCCA5, OsYUCCA5, OsYUC5, YUC5 | Detail |
| C1H12g03710 | 12:16,805,333-16,808,517 | - | C2H12g25999 | CX12g018646 | LOC_Os12g32760 | Os12g0512100 | OsPLT14 | Detail |
| C1H12g17769 | 12:16,819,510-16,828,462 | - | C2H12g03027 | CX12g018223 | LOC_Os12g32820 | Os12g0512700 | OsABCG50, OsPDR23, OsABCG50/PDR23 | Detail |
| C1H12g27986 | 12:16,842,724-16,845,399 | - | C2H12g05645 | CX12g018790 | LOC_Os12g32850 | Os12g0512800 | - | Detail |
| C1H12g26954 | 12:16,866,690-16,867,964 | - | C2H12g07164 | CX12g018119 | LOC_Os12g32880 | Os12g0481000 | - | Detail |
| C1H12g12598 | 12:16,884,466-16,884,777 | + | - | CX1g002184 | LOC_Os10g20310 | Os10g0343900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g16913 | 1:15,158,594-15,161,823 | + | C1H1g24970 | CX1g001239 | - | Os01g0392100 | - | Detail |
| C2H1g23252 | 1:15,545,363-15,549,760 | + | C1H1g30621 | CX1g001890 | LOC_Os01g31270 | Os01g0497400 | - | Detail |
| C2H1g24761 | 1:15,590,162-15,593,762 | + | C1H1g21000 | CX1g004953 | LOC_Os01g31220 | Os01g0496900 | - | Detail |
| C2H1g09436 | 1:15,662,932-15,669,629 | - | C1H1g01185 | CX1g005003 | LOC_Os01g31110 | Os01g0495900 | OsCAF1 | Detail |
| C2H1g03910 | 1:15,965,812-15,968,606 | - | - | - | - | - | - | Detail |
| C2H1g29027 | 1:16,040,397-16,046,624 | + | C1H1g10441 | CX1g000284 | LOC_Os01g31360 | Os01g0498200 | - | Detail |
| C2H1g27470 | 1:16,104,384-16,112,632 | - | C1H1g02507 | CX1g006952 | LOC_Os01g31470 | Os01g0499300 | - | Detail |
| C2H1g12094 | 1:16,149,790-16,157,954 | - | C1H1g29343 | CX1g003784 | LOC_Os01g31580 | Os01g0500500 | - | Detail |
| C2H1g04216 | 1:16,173,130-16,173,825 | + | C1H1g25673 | - | - | - | - | Detail |
| C2H1g24200 | 1:16,188,616-16,189,523 | + | C1H1g15828 | - | - | - | - | Detail |
| C2H1g22944 | 1:16,193,428-16,197,306 | - | C1H1g25829 | - | LOC_Os01g29050 | - | - | Detail |
| C2H1g11567 | 1:16,201,093-16,201,750 | + | - | - | - | - | - | Detail |
| C2H1g16802 | 1:16,204,596-16,213,455 | - | C1H1g02546 | CX1g004477 | LOC_Os01g31629 | Os01g0501000 | - | Detail |
| C2H1g06157 | 1:16,230,878-16,231,386 | - | C1H1g24088 | - | LOC_Os01g31670 | - | - | Detail |
| C2H1g01470 | 1:16,241,881-16,247,062 | - | C1H1g12098 | CX1g007019 | LOC_Os01g31680 | Os01g0501700 | OsTATC | Detail |
| C2H1g01635 | 1:16,250,169-16,251,605 | + | C1H1g01980 | CX1g000224 | LOC_Os01g31690 | Os01g0501800 | - | Detail |
| C2H1g04118 | 1:16,265,565-16,272,819 | + | C1H1g18830 | CX1g003789 | LOC_Os01g31760 | Os01g0502300 | - | Detail |
| C2H1g04225 | 1:16,273,486-16,274,038 | - | - | - | - | - | - | Detail |
| C2H1g07307 | 1:16,300,340-16,309,908 | + | C1H1g06929 | CX1g004837 | LOC_Os01g31770 | Os01g0502400 | - | Detail |
| C2H1g27591 | 1:16,335,639-16,337,685 | - | C1H1g23293 | CX1g002538 | LOC_Os01g31810 | Os01g0502800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |