| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g14223 | 12:16,654,510-16,655,973 | + | C2H12g16950 | CX12g017413 | LOC_Os12g32380 | Os12g0508300 | - | Detail |
| C1H12g04208 | 12:16,664,823-16,667,718 | + | C2H12g15579 | CX12g015589 | LOC_Os12g32390 | Os12g0508400 | - | Detail |
| C1H12g20034 | 12:16,670,612-16,671,628 | + | C2H12g17897 | CX12g015589 | LOC_Os12g32400 | Os12g0508500 | OsbHLH133 | Detail |
| C1H12g01026 | 12:16,674,395-16,674,772 | - | C2H12g05290 | CX12g016543 | - | - | - | Detail |
| C1H12g18134 | 12:16,699,662-16,701,889 | - | C2H12g28152 | - | LOC_Os12g32580 | - | - | Detail |
| C1H12g03703 | 12:16,707,990-16,709,113 | + | C2H12g26520 | CX12g016850 | - | - | - | Detail |
| C1H12g21922 | 12:16,717,076-16,717,663 | - | C2H12g14514 | CX12g017324 | LOC_Os12g32610 | Os12g0510750 | OsSMP2 | Detail |
| C1H12g07006 | 12:16,724,311-16,726,237 | + | C2H12g23023 | CX12g017638 | LOC_Os12g32620 | Os12g0510900 | - | Detail |
| C1H12g03851 | 12:16,728,882-16,731,557 | - | C2H12g01778 | CX12g016065 | LOC_Os12g32630 | Os12g0511000 | - | Detail |
| C1H12g10988 | 12:16,735,500-16,738,577 | + | C2H12g29019 | CX12g017408 | LOC_Os12g32640 | Os12g0511200 | - | Detail |
| C1H12g02725 | 12:16,740,629-16,743,267 | + | C2H12g27722 | CX12g016554 | LOC_Os12g32650 | Os12g0511300 | - | Detail |
| C1H12g25225 | 12:16,744,410-16,749,593 | - | C2H12g10634 | CX12g015393 | LOC_Os12g32660 | Os12g0511400 | - | Detail |
| C1H12g13852 | 12:16,765,611-16,766,183 | + | - | - | - | - | - | Detail |
| C1H12g00024 | 12:16,767,555-16,771,769 | - | C2H12g02344 | CX12g015919 | LOC_Os12g32670 | Os12g0511500 | - | Detail |
| C1H12g02230 | 12:16,796,008-16,803,454 | + | C2H12g11130 | CX12g015792 | LOC_Os12g32750 | Os12g0512000 | YUCCA5, OsYUCCA5, OsYUC5, YUC5 | Detail |
| C1H12g03710 | 12:16,805,333-16,808,517 | - | C2H12g25999 | CX12g018646 | LOC_Os12g32760 | Os12g0512100 | OsPLT14 | Detail |
| C1H12g17769 | 12:16,819,510-16,828,462 | - | C2H12g03027 | CX12g018223 | LOC_Os12g32820 | Os12g0512700 | OsABCG50, OsPDR23, OsABCG50/PDR23 | Detail |
| C1H12g27986 | 12:16,842,724-16,845,399 | - | C2H12g05645 | CX12g018790 | LOC_Os12g32850 | Os12g0512800 | - | Detail |
| C1H12g26954 | 12:16,866,690-16,867,964 | - | C2H12g07164 | CX12g018119 | LOC_Os12g32880 | Os12g0481000 | - | Detail |
| C1H12g12598 | 12:16,884,466-16,884,777 | + | - | CX1g002184 | LOC_Os10g20310 | Os10g0343900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08604 | 3:25,901,690-25,904,587 | + | C1H3g23851 | CX3g029652 | LOC_Os03g49720 | Os03g0704100 | - | Detail |
| C2H3g29014 | 3:25,905,274-25,908,513 | - | C1H3g07852 | CX3g027461 | LOC_Os03g49730 | Os03g0704200 | - | Detail |
| C2H3g23956 | 3:25,908,582-25,908,809 | - | C1H3g06974 | - | LOC_Os03g49730 | Os03g0704200 | - | Detail |
| C2H3g16102 | 3:25,909,309-25,914,224 | + | C1H3g28557 | CX3g029894 | LOC_Os03g49750 | Os03g0704400 | - | Detail |
| C2H3g11078 | 3:25,925,097-25,934,190 | + | C1H3g03526 | CX3g026920 | LOC_Os03g49770 | Os03g0704700 | ORP1C | Detail |
| C2H3g28946 | 3:25,949,107-25,953,644 | - | C1H3g14731 | CX3g030070 | LOC_Os03g49800 | Os03g0705300 | - | Detail |
| C2H3g19805 | 3:26,002,702-26,004,828 | + | C1H3g17034 | CX3g026164 | LOC_Os03g49830 | Os03g0705800 | - | Detail |
| C2H3g12452 | 3:26,030,474-26,031,668 | - | - | - | - | - | - | Detail |
| C2H3g12197 | 3:26,045,202-26,050,452 | - | - | - | - | - | - | Detail |
| C2H3g09610 | 3:26,060,827-26,068,073 | - | C1H3g02900 | CX3g028672 | LOC_Os03g49900 | Os03g0706900 | LE, TT3.1, DGS1 | Detail |
| C2H3g07887 | 3:26,076,876-26,079,201 | + | C1H3g20914 | CX3g028303 | LOC_Os03g49940 | Os03g0707200 | TT3.2 | Detail |
| C2H3g17433 | 3:26,080,830-26,089,167 | - | C1H3g18351 | CX3g029801 | LOC_Os03g49960 | Os03g0707300 | - | Detail |
| C2H3g19955 | 3:26,128,603-26,136,845 | - | C1H3g18483 | CX3g027756 | LOC_Os03g50010 | Os03g0707900 | - | Detail |
| C2H3g30153 | 3:26,141,627-26,143,325 | + | C1H3g03460 | CX3g025431 | LOC_Os03g50030 | Os03g0708000 | - | Detail |
| C2H3g07785 | 3:26,145,791-26,148,691 | - | C1H3g17884 | CX3g025623 | LOC_Os03g50040 | Os03g0708100 | - | Detail |
| C2H3g01941 | 3:26,155,325-26,159,076 | + | C1H3g20236 | CX3g030384 | LOC_Os03g50070 | Os03g0708400 | - | Detail |
| C2H3g11988 | 3:26,159,751-26,160,705 | - | C1H3g01824 | - | LOC_Os03g50080 | Os03g0708500 | - | Detail |
| C2H3g11307 | 3:26,163,243-26,165,468 | - | C1H3g01922 | CX3g030763 | LOC_Os03g50090 | Os03g0708600 | - | Detail |
| C2H3g20554 | 3:26,166,803-26,171,887 | - | C1H3g14178 | CX3g025191 | LOC_Os03g50100 | Os03g0708700 | - | Detail |
| C2H3g12681 | 3:26,175,044-26,175,381 | + | C1H1g20629 | - | LOC_Os07g01114 | Os12g0622200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |