| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g15302 | 1:7,171,945-7,173,218 | - | C2H1g24885 | CX1g006064 | LOC_Os01g14140 | Os01g0243700 | - | Detail |
| C1H1g21204 | 1:7,182,286-7,184,048 | - | C2H1g14058 | CX1g003858 | LOC_Os01g14180 | Os01g0244000 | - | Detail |
| C1H1g22015 | 1:7,198,298-7,200,599 | - | C2H1g29475 | CX1g003858 | LOC_Os01g14220 | Os01g0244400 | - | Detail |
| C1H1g13639 | 1:7,215,238-7,216,512 | - | C2H1g27156 | CX1g003858 | LOC_Os01g14280 | Os01g0245000 | - | Detail |
| C1H1g25297 | 1:7,233,267-7,234,475 | + | C2H1g14773 | CX1g003769 | LOC_Os01g14330 | Os01g0245600 | - | Detail |
| C1H1g05448 | 1:7,245,313-7,253,661 | - | C2H1g07730 | CX1g000804 | LOC_Os01g14370 | Os01g0246100 | - | Detail |
| C1H1g20917 | 1:7,262,135-7,263,152 | + | C2H1g18330 | CX1g002763 | LOC_Os01g14410 | Os01g0246400 | - | Detail |
| C1H1g23943 | 1:7,265,151-7,268,928 | - | C2H1g08066 | CX1g002025 | LOC_Os01g14420 | Os01g0246500 | - | Detail |
| C1H1g28712 | 1:7,271,101-7,271,802 | - | C2H1g28653 | CX1g006604 | LOC_Os01g14430 | Os01g0246601 | - | Detail |
| C1H1g11776 | 1:7,284,246-7,286,901 | + | C2H1g25431 | CX1g004214 | LOC_Os01g14440 | Os01g0246700 | - | Detail |
| C1H1g03620 | 1:7,306,435-7,308,459 | - | C2H1g21282 | CX1g004500 | LOC_Os01g14510 | Os01g0247500 | - | Detail |
| C1H1g20261 | 1:7,313,872-7,316,192 | - | C2H1g08952 | CX1g004212 | LOC_Os01g14520 | Os01g0247700 | - | Detail |
| C1H1g26795 | 1:7,329,052-7,330,318 | - | C2H1g09292 | CX1g001877 | LOC_Os01g14530 | Os01g0247900 | - | Detail |
| C1H1g21898 | 1:7,343,586-7,345,171 | + | C2H1g24520 | CX1g004504 | LOC_Os01g14550 | Os01g0248300 | - | Detail |
| C1H1g31848 | 1:7,348,585-7,353,486 | + | C2H1g04847 | CX1g005900 | LOC_Os01g14580 | Os01g0248400 | - | Detail |
| C1H1g11752 | 1:7,353,539-7,355,210 | - | C2H1g17700 | CX1g001958 | LOC_Os01g14590 | Os01g0248500 | - | Detail |
| C1H1g16786 | 1:7,356,184-7,359,274 | - | C2H1g17259 | CX1g002738 | LOC_Os01g14610 | Os01g0248600 | - | Detail |
| C1H1g18998 | 1:7,370,997-7,371,629 | + | C2H1g15115 | - | LOC_Os01g14640 | Os01g0248800 | - | Detail |
| C1H1g01215 | 1:7,373,753-7,374,629 | - | C2H1g16845 | CX1g002096 | LOC_Os01g14650 | Os01g0248900 | EXPA8, OsEXPA8, OsEXP8, osaEXPa1.17 | Detail |
| C1H1g04124 | 1:7,378,367-7,379,229 | - | C2H1g12724 | CX1g004154 | LOC_Os01g14660 | Os01g0249100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05995 | 3:23,353,840-23,360,112 | + | C1H3g08255 | CX3g025417 | LOC_Os03g44760 | Os03g0650400 | OsAM1 | Detail |
| C2H3g04123 | 3:23,365,568-23,368,654 | + | C1H3g04288 | CX3g029305 | LOC_Os03g44780 | Os03g0650700 | - | Detail |
| C2H3g25934 | 3:23,376,058-23,379,647 | + | C1H3g26002 | CX3g030102 | LOC_Os03g44800 | Os03g0650800 | - | Detail |
| C2H3g09215 | 3:23,380,760-23,383,326 | - | C1H3g15894 | CX3g025882 | LOC_Os03g44810 | Os03g0650900 | OsNLA2 | Detail |
| C2H3g18405 | 3:23,389,822-23,395,637 | + | C1H3g26796 | CX3g030028 | LOC_Os03g44820 | Os03g0651000 | - | Detail |
| C2H3g28118 | 3:23,392,076-23,399,652 | - | C1H3g28349 | CX3g026647 | LOC_Os03g44830 | Os03g0651100 | - | Detail |
| C2H3g18007 | 3:23,412,866-23,416,601 | - | C1H3g24505 | CX3g025530 | LOC_Os03g44840 | Os03g0651300 | - | Detail |
| C2H3g06423 | 3:23,419,178-23,419,672 | + | C1H3g26171 | - | - | - | - | Detail |
| C2H3g02024 | 3:23,425,394-23,426,265 | + | C1H3g24453 | CX3g026588 | LOC_Os03g44860 | - | - | Detail |
| C2H3g28657 | 3:23,436,378-23,436,686 | + | C1H3g26409 | CX3g025130 | LOC_Os03g44880 | Os03g0651800 | - | Detail |
| C2H3g03221 | 3:23,454,058-23,464,939 | + | C1H3g29368 | CX3g027235 | LOC_Os03g44900 | Os03g0652100 | - | Detail |
| C2H3g22550 | 3:23,466,563-23,467,393 | - | C1H3g01838 | CX3g031191 | - | - | - | Detail |
| C2H3g28037 | 3:23,481,141-23,481,464 | - | C1H3g10492 | CX3g027235 | LOC_Os03g44900 | Os03g0652600 | - | Detail |
| C2H3g20973 | 3:23,481,653-23,484,565 | - | C1H3g17818 | CX3g030705 | LOC_Os03g44950 | - | - | Detail |
| C2H3g17941 | 3:23,514,588-23,520,530 | - | C1H3g02859 | CX3g027629 | LOC_Os03g45120 | Os03g0653900 | - | Detail |
| C2H3g06696 | 3:23,550,319-23,556,097 | - | C1H3g07189 | CX3g027165 | LOC_Os03g45170 | Os03g0654400 | - | Detail |
| C2H3g22615 | 3:23,558,639-23,563,286 | - | C1H3g30470 | CX3g029174 | LOC_Os03g45180 | Os03g0654500 | - | Detail |
| C2H3g20364 | 3:23,564,019-23,565,466 | - | C1H3g08581 | CX3g031252 | LOC_Os03g45194 | Os03g0325500 | - | Detail |
| C2H3g01388 | 3:23,566,588-23,571,569 | - | C1H3g11388 | CX3g030732 | LOC_Os03g45194 | Os03g0654600 | NOL | Detail |
| C2H3g23313 | 3:23,573,325-23,581,245 | - | C1H3g03137 | CX3g025719 | LOC_Os09g01375 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |