| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g23750 | 12:15,625,797-15,626,694 | + | C2H12g07691 | CX12g016908 | LOC_Os12g30170 | Os12g0486800 | - | Detail |
| C1H12g14651 | 12:15,629,134-15,636,806 | + | C2H12g21377 | CX12g016152 | LOC_Os12g30180 | Os12g0486900 | - | Detail |
| C1H12g27129 | 12:15,656,662-15,658,960 | + | C2H12g08975 | CX12g018556 | LOC_Os12g30150 | Os12g0487250 | - | Detail |
| C1H12g12520 | 12:15,684,840-15,688,643 | + | C2H12g14841 | CX12g016830 | LOC_Os12g30490 | Os12g0488600 | - | Detail |
| C1H12g21117 | 12:15,692,699-15,695,144 | + | C2H12g14841 | CX12g016830 | LOC_Os12g30490 | Os11g0585700 | - | Detail |
| C1H12g05205 | 12:15,698,934-15,701,235 | + | C2H12g19883 | CX12g018437 | LOC_Os12g30500 | Os12g0488700 | - | Detail |
| C1H12g01587 | 12:15,701,960-15,704,287 | - | C2H12g00331 | CX12g016767 | LOC_Os12g30510 | Os12g0488800 | - | Detail |
| C1H12g00897 | 12:15,706,216-15,710,191 | - | C2H12g27516 | CX12g015737 | LOC_Os12g30520 | Os12g0488900 | - | Detail |
| C1H12g31216 | 12:15,726,451-15,741,262 | + | C2H12g29184 | CX12g016496 | LOC_Os12g30540 | Os12g0489200 | - | Detail |
| C1H12g09938 | 12:15,743,918-15,745,458 | - | C2H12g13742 | CX12g015484 | LOC_Os12g30550 | Os12g0489300 | - | Detail |
| C1H12g08328 | 12:15,745,820-15,747,284 | + | C2H12g24677 | - | - | - | - | Detail |
| C1H12g01925 | 12:15,784,027-15,785,634 | + | C2H12g22458 | CX12g016316 | LOC_Os12g30610 | Os12g0490000 | - | Detail |
| C1H12g30905 | 12:15,787,583-15,788,156 | + | C2H12g04329 | - | - | - | - | Detail |
| C1H12g21815 | 12:15,789,151-15,790,827 | + | C2H12g14509 | CX12g018378 | LOC_Os12g30620 | Os12g0490100 | - | Detail |
| C1H12g05587 | 12:15,801,217-15,802,276 | + | C2H12g12620 | CX12g018015 | LOC_Os12g30640 | Os12g0490566 | - | Detail |
| C1H12g15883 | 12:15,806,322-15,809,687 | - | C2H12g07490 | CX12g017167 | LOC_Os12g30720 | Os12g0490800 | - | Detail |
| C1H12g10430 | 12:15,811,324-15,811,734 | + | C2H12g28186 | CX12g016935 | - | - | - | Detail |
| C1H12g25761 | 12:15,815,752-15,817,795 | - | C2H12g05017 | CX12g015464 | LOC_Os12g30824 | Os12g0491800 | OsTPS21, OsKSL6 | Detail |
| C1H12g01833 | 12:15,821,111-15,822,666 | - | C2H12g00678 | CX12g015464 | LOC_Os12g30800 | Os12g0491800 | OsTPS21, OsKSL6 | Detail |
| C1H12g08021 | 12:15,833,499-15,838,296 | - | C2H12g08859 | CX12g015671 | LOC_Os12g30824 | Os12g0491800 | OsTPS21, OsKSL6 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g22972 | 9:319,742-324,687 | + | C1H9g01741 | CX9g057297 | LOC_Os09g01600 | Os09g0103200 | - | Detail |
| C2H9g16676 | 9:328,751-329,740 | - | - | CX9g056224 | LOC_Os09g01610 | Os09g0103400 | - | Detail |
| C2H9g07969 | 9:332,866-338,494 | + | C1H9g12264 | CX9g055170 | LOC_Os09g01620 | Os09g0103500 | - | Detail |
| C2H9g23774 | 9:340,939-347,729 | - | C1H9g24389 | CX9g055607 | LOC_Os09g01630 | Os09g0103600 | - | Detail |
| C2H9g29883 | 9:352,438-353,571 | + | - | CX9g057259 | LOC_Os09g01640 | Os09g0103700 | - | Detail |
| C2H9g16389 | 9:376,815-377,173 | - | C1H9g20260 | CX9g057224 | - | - | - | Detail |
| C2H9g22729 | 9:378,725-385,026 | + | C1H9g06955 | CX9g055907 | LOC_Os09g01650 | Os09g0103800 | - | Detail |
| C2H9g16634 | 9:406,184-412,350 | - | C1H9g22354 | CX9g057376 | LOC_Os09g01680 | Os09g0104200 | RAD51D, OsRAD51D.3, OsRAD51D, OsRad51D | Detail |
| C2H9g14701 | 9:412,420-415,177 | + | C1H9g21586 | - | LOC_Os09g01690 | Os09g0104300 | - | Detail |
| C2H9g10538 | 9:416,660-419,290 | - | - | CX9g056747 | LOC_Os09g01700 | Os09g0104700 | - | Detail |
| C2H9g17453 | 9:446,949-450,853 | - | C1H9g13033 | CX9g054917 | LOC_Os09g01790 | - | - | Detail |
| C2H9g11873 | 9:488,506-491,881 | + | C1H9g15386 | CX9g056345 | - | - | - | Detail |
| C2H9g07049 | 9:540,701-541,678 | - | - | CX9g057727 | LOC_Os09g01960 | Os09g0106700 | - | Detail |
| C2H9g27759 | 9:579,666-579,827 | - | - | CX9g056249 | LOC_Os09g02000 | Os09g0107400 | - | Detail |
| C2H9g16224 | 9:604,424-611,143 | + | C1H9g28229 | CX9g056897 | LOC_Os09g02130 | Os09g0108400 | - | Detail |
| C2H9g00527 | 9:621,532-627,797 | + | C1H9g14656 | CX9g058002 | LOC_Os09g02140 | Os09g0108600 | - | Detail |
| C2H9g13991 | 9:630,539-631,420 | - | - | - | - | - | - | Detail |
| C2H9g03100 | 9:654,975-655,436 | + | - | CX9g056432 | LOC_Os09g02150 | - | - | Detail |
| C2H9g06082 | 9:665,702-671,407 | - | C1H9g00172 | CX9g056152 | LOC_Os09g02170 | Os09g0109500 | - | Detail |
| C2H9g24122 | 9:673,188-673,482 | + | C1H9g18224 | - | LOC_Os09g02180 | Os09g0109600 | OsDSSR1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |