| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g16943 | 12:15,320,734-15,325,230 | - | C2H12g22196 | CX12g017949 | LOC_Os12g29690 | Os12g0481400 | - | Detail |
| C1H12g29867 | 12:15,342,642-15,343,148 | + | - | - | - | - | - | Detail |
| C1H12g16080 | 12:15,345,279-15,347,224 | - | C2H12g19067 | CX12g018243 | LOC_Os12g29690 | Os12g0481400 | - | Detail |
| C1H12g30866 | 12:15,410,531-15,412,653 | - | C2H12g03440 | CX12g016489 | LOC_Os12g29740 | Os12g0482500 | - | Detail |
| C1H12g00188 | 12:15,413,208-15,414,753 | - | C2H12g03440 | CX12g016489 | LOC_Os12g29740 | Os12g0482500 | - | Detail |
| C1H12g00423 | 12:15,419,678-15,421,736 | + | C2H12g08552 | CX12g016137 | LOC_Os12g29750 | Os12g0482600 | - | Detail |
| C1H12g22064 | 12:15,421,857-15,424,365 | - | C2H12g05278 | CX12g015626 | LOC_Os12g29760 | Os12g0482700 | - | Detail |
| C1H12g10141 | 12:15,435,827-15,437,620 | + | C2H12g26427 | CX12g017839 | LOC_Os12g29950 | Os12g0484600 | - | Detail |
| C1H12g29378 | 12:15,442,526-15,443,611 | - | C2H12g11455 | CX12g017524 | LOC_Os12g29960 | Os12g0484700 | - | Detail |
| C1H12g24172 | 12:15,447,467-15,450,693 | + | C2H12g08567 | CX12g015350 | LOC_Os12g29980 | Os12g0484900 | OsGRF7 | Detail |
| C1H12g29801 | 12:15,457,787-15,465,676 | - | C2H12g05159 | CX12g018508 | LOC_Os12g29990 | Os12g0485000 | - | Detail |
| C1H12g11531 | 12:15,469,776-15,470,774 | - | C2H12g25056 | CX12g015899 | LOC_Os12g30000 | Os12g0485150 | - | Detail |
| C1H12g09384 | 12:15,482,498-15,491,101 | + | C2H12g03831 | CX12g017178 | LOC_Os12g30020 | Os12g0485400 | - | Detail |
| C1H12g31253 | 12:15,491,480-15,494,552 | - | C2H12g17109 | CX12g018159 | LOC_Os12g30030 | Os12g0485500 | - | Detail |
| C1H12g21382 | 12:15,508,652-15,512,338 | - | - | CX12g016953 | - | - | - | Detail |
| C1H12g30089 | 12:15,520,397-15,524,413 | - | C2H12g25271 | CX12g015829 | LOC_Os12g30040 | Os12g0485600 | OsLHT6 | Detail |
| C1H12g29069 | 12:15,539,132-15,539,575 | + | C2H12g19680 | CX12g016793 | LOC_Os12g30060 | Os12g0485800 | - | Detail |
| C1H12g16717 | 12:15,608,356-15,608,643 | + | C2H12g25902 | - | - | - | - | Detail |
| C1H12g30017 | 12:15,608,698-15,609,853 | + | C2H12g15627 | CX12g015218 | LOC_Os12g30150 | Os12g0486600 | OsCPK27 | Detail |
| C1H12g18357 | 12:15,609,890-15,611,615 | + | C2H12g15434 | CX12g015218 | LOC_Os12g30150 | Os12g0486600 | OsCPK27 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g28299 | 5:22,170,070-22,171,101 | - | C1H5g17231 | CX5g038315 | LOC_Os05g45710 | Os05g0533500 | OsSAT1;3 | Detail |
| C2H5g13260 | 5:22,173,794-22,181,115 | + | C1H5g17232 | CX5g039556 | LOC_Os05g45720 | Os05g0533600 | SSIVB, OsSSIVb, SSIV-2, OsSSIV-2, SSIVb, SSIV-2 | Detail |
| C2H5g03217 | 5:22,181,740-22,183,798 | + | C1H5g27858 | CX5g039089 | LOC_Os05g45730 | Os05g0533700 | - | Detail |
| C2H5g09746 | 5:22,184,871-22,186,393 | + | C1H5g22620 | CX5g038471 | LOC_Os05g45740 | Os05g0533800 | - | Detail |
| C2H5g27500 | 5:22,187,563-22,191,307 | + | C1H5g12717 | CX5g038527 | LOC_Os05g45750 | Os05g0533900 | - | Detail |
| C2H5g28882 | 5:22,191,750-22,193,669 | - | C1H5g28841 | CX5g040105 | LOC_Os05g45760 | Os05g0534000 | - | Detail |
| C2H5g06715 | 5:22,194,656-22,196,891 | + | C1H5g15352 | CX5g036728 | LOC_Os05g45770 | Os05g0534100 | - | Detail |
| C2H5g12404 | 5:22,208,576-22,210,028 | + | C1H5g21827 | CX5g040749 | LOC_Os05g45810 | Os05g0534400 | OsCBL4 | Detail |
| C2H5g20385 | 5:22,210,537-22,213,936 | - | C1H5g13213 | CX5g037499 | LOC_Os05g45820 | Os05g0534500 | - | Detail |
| C2H5g26781 | 5:22,216,968-22,222,503 | - | C1H5g03368 | CX5g039192 | LOC_Os05g45830 | Os05g0534600 | - | Detail |
| C2H5g01370 | 5:22,224,945-22,230,054 | + | C1H5g18942 | CX5g040022 | LOC_Os05g45840 | Os05g0534800 | - | Detail |
| C2H5g21069 | 5:22,231,206-22,233,860 | + | C1H5g12782 | CX5g037833 | LOC_Os05g45850 | Os05g0534900 | - | Detail |
| C2H5g29794 | 5:22,237,286-22,240,510 | - | C1H5g14563 | CX5g037747 | LOC_Os05g45860 | Os05g0535100 | - | Detail |
| C2H5g19676 | 5:22,242,023-22,242,482 | + | C1H5g01171 | - | - | - | - | Detail |
| C2H5g22490 | 5:22,243,519-22,244,341 | - | C1H5g05296 | CX5g040472 | LOC_Os01g52020 | Os07g0631500 | - | Detail |
| C2H5g10427 | 5:22,244,622-22,246,760 | + | C1H5g29728 | CX5g038811 | LOC_Os05g45870 | Os05g0535200 | - | Detail |
| C2H5g08565 | 5:22,249,637-22,250,592 | + | C1H5g30804 | CX5g038750 | LOC_Os05g45870 | Os05g0535300 | - | Detail |
| C2H5g18762 | 5:22,252,723-22,254,144 | - | - | - | - | - | - | Detail |
| C2H5g02857 | 5:22,255,846-22,261,277 | - | - | - | - | - | - | Detail |
| C2H5g19368 | 5:22,263,889-22,267,361 | + | C1H5g31590 | CX5g037476 | LOC_Os05g45880 | Os05g0535400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |