| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g14488 | 1:6,955,731-6,962,195 | + | C2H1g17215 | CX1g005556 | LOC_Os01g13730 | Os01g0238900 | - | Detail |
| C1H1g14591 | 1:6,963,950-6,969,619 | - | C2H1g24808 | CX1g007100 | LOC_Os01g13740 | Os01g0239000 | OsGLK2 | Detail |
| C1H1g15330 | 1:6,984,350-6,989,331 | + | C2H1g12393 | CX1g006141 | LOC_Os01g13760 | Os01g0239100 | - | Detail |
| C1H1g10674 | 1:6,996,395-7,000,575 | - | C2H1g30390 | CX1g003377 | LOC_Os01g13770 | Os01g0239200 | TPT | Detail |
| C1H1g29806 | 1:7,019,303-7,023,134 | + | C2H1g05246 | CX1g003032 | LOC_Os01g13800 | Os01g0239700 | - | Detail |
| C1H1g14821 | 1:7,049,542-7,050,345 | + | C2H1g17922 | CX1g003858 | LOC_Os01g13870 | Os01g0240700 | - | Detail |
| C1H1g26893 | 1:7,050,411-7,050,985 | + | C2H1g04288 | CX1g003858 | LOC_Os01g13870 | Os01g0240700 | - | Detail |
| C1H1g22711 | 1:7,059,594-7,060,586 | + | C2H1g22442 | CX1g002448 | LOC_Os01g13880 | Os01g0302900 | - | Detail |
| C1H1g13790 | 1:7,069,726-7,071,459 | + | C2H1g01439 | CX1g003506 | LOC_Os01g13930 | Os01g0241000 | - | Detail |
| C1H1g16293 | 1:7,072,915-7,076,847 | - | C2H1g00102 | CX1g001602 | LOC_Os01g13940 | Os01g0241100 | - | Detail |
| C1H1g05433 | 1:7,097,406-7,098,101 | + | C2H1g07537 | CX1g005498 | LOC_Os01g14010 | Os01g0242200 | - | Detail |
| C1H1g01093 | 1:7,098,236-7,099,231 | + | C2H1g07537 | CX1g000413 | LOC_Os01g14010 | Os01g0242200 | - | Detail |
| C1H1g03627 | 1:7,102,286-7,105,038 | + | C2H1g23925 | CX1g001627 | LOC_Os01g14020 | Os01g0242300 | - | Detail |
| C1H1g31589 | 1:7,107,560-7,109,365 | - | C2H1g27390 | CX1g002990 | LOC_Os01g14040 | Os01g0242500 | - | Detail |
| C1H1g24637 | 1:7,111,503-7,117,219 | - | C2H1g18566 | CX1g001173 | LOC_Os01g14050 | Os01g0242600 | - | Detail |
| C1H1g21695 | 1:7,120,754-7,123,050 | + | C2H1g05181 | CX1g006070 | LOC_Os01g14070 | Os01g0242900 | - | Detail |
| C1H1g07595 | 1:7,124,775-7,126,706 | - | C2H1g29594 | CX1g002725 | LOC_Os01g14080 | Os01g0243000 | - | Detail |
| C1H1g05434 | 1:7,129,458-7,137,797 | + | C2H1g03298 | CX1g006119 | LOC_Os01g14090 | Os01g0243100 | - | Detail |
| C1H1g06150 | 1:7,138,858-7,144,104 | - | C2H1g23199 | CX1g001271 | LOC_Os01g14100 | Os01g0243200 | - | Detail |
| C1H1g06722 | 1:7,170,620-7,171,294 | - | C2H1g18066 | CX1g005084 | LOC_Os01g14130 | Os01g0243600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20318 | 4:23,380,102-23,380,731 | + | - | CX4g032986 | LOC_Os04g45834 | Os04g0542000 | OsS40-5 | Detail |
| C2H4g15404 | 4:23,387,657-23,390,558 | - | C1H4g01207 | CX4g036589 | LOC_Os04g45860 | Os04g0542200 | - | Detail |
| C2H4g15215 | 4:23,390,655-23,391,125 | - | C1H4g01207 | CX4g036589 | LOC_Os04g45860 | Os04g0542200 | - | Detail |
| C2H4g05921 | 4:23,402,042-23,405,453 | - | C1H4g26797 | CX4g034574 | LOC_Os04g45900 | Os04g0542800 | YSL16, OsYSL16, Os-YSL16, OsYs14 | Detail |
| C2H4g03772 | 4:23,410,292-23,413,618 | + | C1H4g00917 | CX4g031872 | LOC_Os04g45910 | Os04g0542900 | - | Detail |
| C2H4g18044 | 4:23,413,925-23,415,547 | - | C1H4g12022 | CX4g033127 | LOC_Os04g45920 | Os04g0543000 | OsRLCK155 | Detail |
| C2H4g06135 | 4:23,429,014-23,433,474 | + | C1H4g12009 | CX4g031771 | LOC_Os04g45930 | Os04g0543200 | - | Detail |
| C2H4g28036 | 4:23,439,432-23,440,064 | + | C1H4g29842 | CX4g033722 | LOC_Os04g45940 | Os04g0543500 | - | Detail |
| C2H4g07566 | 4:23,442,911-23,446,114 | - | C1H4g23068 | CX4g033912 | LOC_Os04g45950 | Os04g0543600 | - | Detail |
| C2H4g03875 | 4:23,446,261-23,446,641 | - | C1H4g23068 | CX4g033912 | - | Os02g0655700 | - | Detail |
| C2H4g23324 | 4:23,449,934-23,454,406 | + | C1H4g25515 | CX4g032899 | LOC_Os04g45960 | Os04g0543700 | OsMSP | Detail |
| C2H4g27717 | 4:23,460,578-23,465,286 | + | C1H4g25512 | CX4g035856 | LOC_Os04g45970 | Os04g0543900 | - | Detail |
| C2H4g03252 | 4:23,470,363-23,470,812 | + | - | CX4g032582 | LOC_Os04g45980 | Os04g0544000 | - | Detail |
| C2H4g24460 | 4:23,473,283-23,475,811 | - | C1H4g13260 | CX4g031976 | LOC_Os04g45990 | Os04g0544100 | SDG703 | Detail |
| C2H4g09721 | 4:23,481,284-23,483,216 | - | C1H4g05097 | CX4g031985 | LOC_Os04g46000 | Os04g0544200 | OsCYCP4;4 | Detail |
| C2H4g14132 | 4:23,485,628-23,487,989 | - | C1H4g03288 | CX4g036665 | LOC_Os04g46010 | Os04g0544400 | - | Detail |
| C2H4g05003 | 4:23,489,787-23,493,126 | - | C1H4g26782 | CX4g032526 | LOC_Os04g46020 | Os04g0544500 | - | Detail |
| C2H4g02497 | 4:23,503,765-23,510,671 | - | C1H4g29118 | CX4g034792 | LOC_Os04g46050 | Os04g0544900 | - | Detail |
| C2H4g17284 | 4:23,511,983-23,513,401 | - | C1H4g17617 | CX4g035537 | LOC_Os04g46060 | Os04g0545000 | OsWRKY36, SGSD3 | Detail |
| C2H4g22662 | 4:23,516,885-23,517,627 | - | C1H4g13000 | CX4g035537 | LOC_Os04g46060 | Os04g0545000 | OsWRKY36, SGSD3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |