| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g14488 | 1:6,955,731-6,962,195 | + | C2H1g17215 | CX1g005556 | LOC_Os01g13730 | Os01g0238900 | - | Detail |
| C1H1g14591 | 1:6,963,950-6,969,619 | - | C2H1g24808 | CX1g007100 | LOC_Os01g13740 | Os01g0239000 | OsGLK2 | Detail |
| C1H1g15330 | 1:6,984,350-6,989,331 | + | C2H1g12393 | CX1g006141 | LOC_Os01g13760 | Os01g0239100 | - | Detail |
| C1H1g10674 | 1:6,996,395-7,000,575 | - | C2H1g30390 | CX1g003377 | LOC_Os01g13770 | Os01g0239200 | TPT | Detail |
| C1H1g29806 | 1:7,019,303-7,023,134 | + | C2H1g05246 | CX1g003032 | LOC_Os01g13800 | Os01g0239700 | - | Detail |
| C1H1g14821 | 1:7,049,542-7,050,345 | + | C2H1g17922 | CX1g003858 | LOC_Os01g13870 | Os01g0240700 | - | Detail |
| C1H1g26893 | 1:7,050,411-7,050,985 | + | C2H1g04288 | CX1g003858 | LOC_Os01g13870 | Os01g0240700 | - | Detail |
| C1H1g22711 | 1:7,059,594-7,060,586 | + | C2H1g22442 | CX1g002448 | LOC_Os01g13880 | Os01g0302900 | - | Detail |
| C1H1g13790 | 1:7,069,726-7,071,459 | + | C2H1g01439 | CX1g003506 | LOC_Os01g13930 | Os01g0241000 | - | Detail |
| C1H1g16293 | 1:7,072,915-7,076,847 | - | C2H1g00102 | CX1g001602 | LOC_Os01g13940 | Os01g0241100 | - | Detail |
| C1H1g05433 | 1:7,097,406-7,098,101 | + | C2H1g07537 | CX1g005498 | LOC_Os01g14010 | Os01g0242200 | - | Detail |
| C1H1g01093 | 1:7,098,236-7,099,231 | + | C2H1g07537 | CX1g000413 | LOC_Os01g14010 | Os01g0242200 | - | Detail |
| C1H1g03627 | 1:7,102,286-7,105,038 | + | C2H1g23925 | CX1g001627 | LOC_Os01g14020 | Os01g0242300 | - | Detail |
| C1H1g31589 | 1:7,107,560-7,109,365 | - | C2H1g27390 | CX1g002990 | LOC_Os01g14040 | Os01g0242500 | - | Detail |
| C1H1g24637 | 1:7,111,503-7,117,219 | - | C2H1g18566 | CX1g001173 | LOC_Os01g14050 | Os01g0242600 | - | Detail |
| C1H1g21695 | 1:7,120,754-7,123,050 | + | C2H1g05181 | CX1g006070 | LOC_Os01g14070 | Os01g0242900 | - | Detail |
| C1H1g07595 | 1:7,124,775-7,126,706 | - | C2H1g29594 | CX1g002725 | LOC_Os01g14080 | Os01g0243000 | - | Detail |
| C1H1g05434 | 1:7,129,458-7,137,797 | + | C2H1g03298 | CX1g006119 | LOC_Os01g14090 | Os01g0243100 | - | Detail |
| C1H1g06150 | 1:7,138,858-7,144,104 | - | C2H1g23199 | CX1g001271 | LOC_Os01g14100 | Os01g0243200 | - | Detail |
| C1H1g06722 | 1:7,170,620-7,171,294 | - | C2H1g18066 | CX1g005084 | LOC_Os01g14130 | Os01g0243600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g01731 | 6:22,938,721-22,951,042 | + | C1H6g20754 | CX6g045240 | LOC_Os06g43760 | Os06g0645400 | - | Detail |
| C2H6g19060 | 6:22,958,758-22,962,340 | - | C1H6g28289 | CX6g044887 | LOC_Os06g43780 | Os06g0645600 | - | Detail |
| C2H6g03809 | 6:22,963,538-22,977,258 | - | C1H6g09143 | CX6g044295 | LOC_Os06g43790 | Os06g0645700 | - | Detail |
| C2H6g16896 | 6:22,978,375-22,980,930 | - | C1H6g02577 | CX6g042731 | LOC_Os06g43800 | Os06g0646000 | - | Detail |
| C2H6g00144 | 6:23,007,540-23,013,374 | + | C1H6g04976 | CX6g042688 | LOC_Os06g43840 | Os06g0646400 | - | Detail |
| C2H6g05559 | 6:23,017,922-23,020,338 | + | C1H6g25984 | CX6g045272 | LOC_Os06g43850 | Os06g0646500 | - | Detail |
| C2H6g16940 | 6:23,021,857-23,024,477 | - | C1H6g26077 | CX6g045626 | LOC_Os06g43860 | Os06g0646600 | HOS59, HOS59S | Detail |
| C2H6g02597 | 6:23,031,532-23,035,222 | - | C1H6g19436 | CX6g045351 | LOC_Os06g43870 | - | - | Detail |
| C2H6g24337 | 6:23,045,473-23,048,768 | - | C1H6g29846 | CX6g042928 | LOC_Os06g43880 | Os06g0646900 | OsHGGT | Detail |
| C2H6g29125 | 6:23,052,328-23,054,115 | + | C1H6g00877 | CX6g042487 | LOC_Os06g43900 | Os06g0647100 | - | Detail |
| C2H6g13204 | 6:23,060,189-23,064,493 | + | C1H6g08065 | CX6g041230 | LOC_Os06g43910 | Os06g0647200 | ORR5, ORR5, Orr5, OsRR25, Rrb3, OsRR21, OsRRB3 | Detail |
| C2H6g09236 | 6:23,064,769-23,070,371 | - | C1H6g31723 | CX6g041258 | LOC_Os06g43930 | Os06g0647400 | - | Detail |
| C2H6g29946 | 6:23,099,382-23,101,931 | - | C1H6g19263 | CX6g043868 | LOC_Os06g43980 | - | - | Detail |
| C2H6g15797 | 6:23,105,916-23,107,291 | - | C1H6g04314 | CX6g041862 | LOC_Os06g43990 | Os06g0648500 | - | Detail |
| C2H6g19123 | 6:23,116,876-23,119,310 | + | C1H6g02827 | CX6g043505 | - | Os06g0531600 | - | Detail |
| C2H6g25130 | 6:23,126,596-23,127,989 | - | C1H6g19092 | CX6g041428 | LOC_Os06g44010 | Os06g0649000 | WRKY28, WRKY GENE 28 | Detail |
| C2H6g09048 | 6:23,143,335-23,152,171 | + | C1H6g01999 | CX6g042578 | LOC_Os06g44030 | Os06g0649500 | - | Detail |
| C2H6g02564 | 6:23,178,530-23,182,815 | + | C1H6g07514 | CX6g041592 | LOC_Os06g44040 | Os06g0649700 | - | Detail |
| C2H6g25962 | 6:23,185,002-23,187,647 | - | C1H6g08177 | CX6g042762 | LOC_Os06g44050 | Os06g0649800 | Sdt97 | Detail |
| C2H6g16416 | 6:23,191,220-23,196,018 | - | C1H6g22257 | CX6g041956 | LOC_Os06g44060 | Os06g0649900 | spPLD | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |