| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g07677 | 12:11,668,238-11,669,431 | + | C2H12g11907 | CX12g015513 | LOC_Os12g23460 | - | - | Detail |
| C1H12g25023 | 12:11,762,683-11,763,666 | + | C2H12g10311 | CX12g017134 | LOC_Os12g23700 | Os12g0424700 | OsCDKF;2 | Detail |
| C1H12g03552 | 12:11,809,360-11,816,896 | + | C2H12g15775 | CX12g018433 | LOC_Os12g23760 | Os12g0425600 | - | Detail |
| C1H12g11675 | 12:11,830,721-11,831,123 | + | C2H12g03201 | CX12g016330 | LOC_Os12g23820 | - | - | Detail |
| C1H12g23241 | 12:11,870,201-11,873,060 | + | C2H12g08233 | CX12g018205 | LOC_Os09g19790 | Os09g0362500 | - | Detail |
| C1H12g26832 | 12:11,875,449-11,877,834 | - | C2H12g02754 | CX12g017422 | LOC_Os12g23930 | Os12g0427000 | - | Detail |
| C1H12g22336 | 12:11,881,499-11,882,677 | + | C2H12g18639 | CX12g017255 | LOC_Os12g23940 | Os12g0427100 | - | Detail |
| C1H12g28928 | 12:11,888,899-11,890,002 | + | C2H12g23524 | CX12g016259 | LOC_Os12g23950 | Os12g0427450 | - | Detail |
| C1H12g06272 | 12:11,890,361-11,890,819 | - | C2H12g05079 | CX12g017870 | - | - | - | Detail |
| C1H12g14938 | 12:11,904,080-11,906,281 | - | C2H12g28772 | CX12g016199 | LOC_Os12g23980 | Os12g0427600 | OsSUB63 | Detail |
| C1H12g17766 | 12:11,929,799-11,931,868 | + | C2H12g06293 | CX12g017258 | - | Os12g0299650 | - | Detail |
| C1H12g20606 | 12:11,950,595-11,951,821 | + | C2H12g03878 | CX12g018431 | LOC_Os12g24020 | Os12g0428000 | - | Detail |
| C1H12g06332 | 12:11,961,537-11,967,545 | + | C2H12g14327 | CX12g018192 | - | Os12g0446700 | - | Detail |
| C1H12g21550 | 12:11,985,924-11,988,027 | + | C2H12g20607 | CX12g016209 | - | - | - | Detail |
| C1H12g12526 | 12:11,990,009-12,001,155 | + | C2H12g16286 | CX12g016209 | LOC_Os12g24080 | Os12g0428600 | - | Detail |
| C1H12g14155 | 12:12,063,487-12,084,279 | - | C2H12g00375 | CX12g015869 | LOC_Os12g24170 | Os12g0429200 | - | Detail |
| C1H12g03493 | 12:12,114,810-12,115,402 | + | C2H12g22470 | CX12g018105 | - | Os12g0430900 | - | Detail |
| C1H12g20362 | 12:12,116,408-12,117,282 | + | C2H12g14630 | CX12g018105 | LOC_Os12g24240 | Os12g0430900 | - | Detail |
| C1H12g01462 | 12:12,117,633-12,131,524 | - | C2H12g09366 | CX12g016236 | LOC_Os12g24250 | Os12g0430000 | - | Detail |
| C1H12g02746 | 12:12,201,469-12,203,154 | + | C2H12g04517 | CX12g018132 | LOC_Os12g24320 | Os12g0431100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g18962 | 5:12,540,821-12,542,672 | - | C1H5g00809 | CX5g037533 | LOC_Os05g25560 | Os05g0319900 | - | Detail |
| C2H5g16379 | 5:12,560,833-12,561,348 | + | C1H5g07771 | CX5g040926 | LOC_Os05g25600 | - | - | Detail |
| C2H5g17208 | 5:12,564,172-12,565,033 | + | C1H5g18434 | CX5g040614 | LOC_Os05g25620 | Os05g0320500 | - | Detail |
| C2H5g12884 | 5:12,571,540-12,575,563 | - | C1H5g29408 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C2H5g23272 | 5:12,622,131-12,622,888 | + | C1H5g31853 | CX5g039065 | - | Os05g0321900 | - | Detail |
| C2H5g30247 | 5:12,623,482-12,626,593 | + | C1H5g21190 | CX5g039065 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| C2H5g20457 | 5:12,642,054-12,643,214 | + | C1H5g09562 | CX5g039731 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| C2H5g00966 | 5:12,649,272-12,652,168 | + | C1H5g20684 | CX5g037483 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| C2H5g05199 | 5:12,658,867-12,659,098 | - | - | CX5g040463 | - | - | - | Detail |
| C2H5g12832 | 5:12,659,126-12,659,341 | - | C1H5g15138 | CX5g037550 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| C2H5g27944 | 5:12,666,481-12,670,358 | + | C1H5g03510 | - | - | - | - | Detail |
| C2H5g23193 | 5:12,666,616-12,670,222 | - | C1H5g02171 | CX5g037938 | LOC_Os05g25320 | Os05g0475600 | - | Detail |
| C2H5g25840 | 5:12,682,852-12,686,503 | + | C1H5g07569 | CX5g038231 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| C2H5g02562 | 5:12,687,807-12,692,024 | + | C1H5g09336 | CX5g039355 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| C2H5g29319 | 5:12,693,761-12,695,203 | + | C1H5g18365 | CX5g038450 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C2H5g21674 | 5:12,722,634-12,724,518 | + | C1H5g16408 | CX5g037596 | LOC_Os05g25170 | - | - | Detail |
| C2H5g11879 | 5:12,724,950-12,726,343 | + | C1H5g24963 | CX5g039314 | LOC_Os05g25170 | - | - | Detail |
| C2H5g22294 | 5:12,730,462-12,732,138 | + | C1H5g19700 | CX5g038330 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C2H5g05113 | 5:12,732,485-12,735,940 | - | C1H5g26142 | CX5g040251 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| C2H5g27623 | 5:12,768,072-12,770,998 | - | C1H5g16305 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |