| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g09047 | 12:10,730,721-10,737,868 | + | C2H12g18879 | CX12g016009 | LOC_Os12g21700 | Os12g0405100 | - | Detail |
| C1H12g11227 | 12:10,739,374-10,742,629 | + | C2H12g13525 | CX12g015064 | LOC_Os12g21710 | Os12g0405200 | T20, HTD12 | Detail |
| C1H12g24672 | 12:10,765,463-10,769,846 | + | C2H12g28725 | - | - | Os12g0405700 | - | Detail |
| C1H12g12079 | 12:10,778,339-10,781,193 | - | C2H12g11042 | CX12g017894 | LOC_Os12g21789 | Os12g0406100 | - | Detail |
| C1H12g19301 | 12:10,784,195-10,787,653 | - | C2H12g07596 | CX3g025427 | LOC_Os12g21798 | Os12g0406200 | - | Detail |
| C1H12g26931 | 12:10,789,718-10,790,349 | - | C2H12g04795 | - | LOC_Os12g21810 | Os12g0406333 | - | Detail |
| C1H12g00416 | 12:10,819,133-10,819,876 | - | C2H12g20448 | CX12g017259 | LOC_Os12g21820 | Os12g0406333 | - | Detail |
| C1H12g01344 | 12:10,851,701-10,853,898 | - | C2H12g16576 | CX12g015535 | LOC_Os12g21890 | Os12g0407200 | - | Detail |
| C1H12g03871 | 12:10,854,914-10,857,025 | - | C2H12g17465 | CX12g015077 | LOC_Os12g21870 | Os12g0407300 | - | Detail |
| C1H12g08395 | 12:10,860,869-10,861,579 | + | C2H12g12292 | - | - | - | - | Detail |
| C1H12g14937 | 12:10,863,086-10,871,531 | - | C2H12g22133 | CX12g015535 | LOC_Os12g21890 | Os12g0407500 | - | Detail |
| C1H12g00949 | 12:10,883,845-10,885,391 | + | C2H12g07548 | CX12g016372 | LOC_Os12g21930 | Os12g0407900 | - | Detail |
| C1H12g19547 | 12:10,891,242-10,893,485 | - | C2H12g12037 | CX12g016878 | LOC_Os12g21940 | Os12g0408000 | - | Detail |
| C1H12g05008 | 12:10,913,635-10,917,337 | - | C2H12g18309 | CX12g016707 | LOC_Os12g22030 | Os12g0409000 | - | Detail |
| C1H12g31614 | 12:10,984,676-10,992,580 | - | C2H12g27636 | CX12g016674 | LOC_Os12g22110 | Os12g0409700 | - | Detail |
| C1H12g05367 | 12:11,145,954-11,163,791 | - | C2H12g21813 | CX12g016982 | LOC_Os12g22284 | Os12g0411700 | - | Detail |
| C1H12g14430 | 12:11,225,261-11,228,627 | - | C2H12g08728 | CX12g016237 | LOC_Os12g22600 | Os12g0414500 | - | Detail |
| C1H12g21725 | 12:11,240,960-11,244,480 | + | C2H12g11833 | CX12g018800 | LOC_Os12g22620 | Os12g0414900 | - | Detail |
| C1H12g04961 | 12:11,263,533-11,263,943 | - | C2H12g00152 | CX5g040190 | LOC_Os12g22680 | Os12g0415800 | - | Detail |
| C1H12g02345 | 12:11,311,261-11,312,023 | + | C2H12g28614 | CX12g016960 | LOC_Os12g22760 | Os12g0111900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08088 | 1:23,044,591-23,047,367 | + | C1H1g31055 | CX1g002458 | LOC_Os01g45350 | Os01g0640600 | - | Detail |
| C2H1g22980 | 1:23,046,848-23,048,906 | - | C1H1g10058 | CX1g004617 | LOC_Os01g45360 | Os01g0640700 | - | Detail |
| C2H1g13504 | 1:23,051,648-23,054,849 | - | C1H1g19962 | CX1g003997 | LOC_Os01g45370 | Os01g0640800 | - | Detail |
| C2H1g09207 | 1:23,055,650-23,059,742 | + | C1H1g17185 | CX1g000116 | LOC_Os01g45380 | Os01g0641000 | - | Detail |
| C2H1g17482 | 1:23,061,086-23,064,129 | + | C1H1g25061 | CX1g004780 | LOC_Os01g45390 | Os01g0641100 | - | Detail |
| C2H1g02385 | 1:23,078,541-23,081,482 | - | C1H1g31552 | CX1g004195 | LOC_Os01g45439 | Os01g0641700 | - | Detail |
| C2H1g03402 | 1:23,086,625-23,088,923 | + | C1H1g00902 | CX1g003051 | LOC_Os01g45450 | Os01g0641800 | - | Detail |
| C2H1g07647 | 1:23,090,833-23,091,147 | + | C1H1g12918 | CX1g005344 | LOC_Os01g45460 | Os01g0642000 | - | Detail |
| C2H1g14331 | 1:23,091,174-23,098,582 | + | C1H1g12918 | CX1g005344 | LOC_Os01g45460 | Os01g0642100 | - | Detail |
| C2H1g23910 | 1:23,098,762-23,099,498 | - | C1H1g06064 | - | LOC_Os01g45470 | Os01g0642200 | - | Detail |
| C2H1g05902 | 1:23,132,843-23,134,398 | + | C1H1g02209 | CX1g000192 | LOC_Os01g45520 | Os01g0642801 | - | Detail |
| C2H1g10748 | 1:23,134,990-23,137,497 | - | C1H1g26078 | CX1g001242 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| C2H1g09079 | 1:23,137,588-23,138,064 | - | C1H1g26078 | CX1g001242 | LOC_Os01g45530 | Os01g0642900 | - | Detail |
| C2H1g05185 | 1:23,155,106-23,159,500 | + | C1H1g21876 | CX1g003646 | LOC_Os01g45550 | Os01g0643300 | - | Detail |
| C2H1g02636 | 1:23,170,308-23,173,345 | - | C1H1g25133 | CX1g003628 | LOC_Os01g45570 | Os01g0643600 | SGD2, OsHOX3, SGD2/OsHOX3 | Detail |
| C2H1g17274 | 1:23,188,624-23,193,473 | - | C1H1g17824 | CX1g005269 | LOC_Os01g45620 | Os01g0643800 | - | Detail |
| C2H1g01755 | 1:23,197,092-23,198,684 | + | C1H1g14596 | CX1g004663 | LOC_Os01g45640 | Os01g0644000 | - | Detail |
| C2H1g00660 | 1:23,216,768-23,217,823 | - | C1H1g08154 | CX1g003016 | LOC_Os01g45730 | Os01g0645000 | - | Detail |
| C2H1g06994 | 1:23,226,508-23,233,386 | + | C1H1g06404 | CX1g001972 | LOC_Os01g45750 | Os01g0645200 | - | Detail |
| C2H1g23683 | 1:23,246,717-23,248,981 | + | C1H1g20018 | CX1g005018 | LOC_Os01g45760 | Os01g0645400 | YUCCA1, OsYUCCA1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |