| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g15979 | 12:8,335,029-8,342,576 | + | C2H12g18759 | CX12g018306 | LOC_Os12g17310 | Os12g0271600 | - | Detail |
| C1H12g06675 | 12:8,342,868-8,347,120 | - | C2H12g24223 | CX12g018414 | LOC_Os12g17320 | Os12g0271700 | OsSPS3 | Detail |
| C1H12g07805 | 12:8,352,296-8,357,061 | - | C2H12g18180 | CX12g018649 | LOC_Os12g17330 | Os12g0270675 | - | Detail |
| C1H12g12623 | 12:8,364,663-8,365,202 | - | C2H12g08278 | CX12g016852 | LOC_Os12g17410 | Os12g0272800 | NRTP1 | Detail |
| C1H12g21564 | 12:8,369,649-8,370,545 | - | C2H12g19493 | CX12g016852 | LOC_Os12g17480 | Os12g0273266 | - | Detail |
| C1H12g20605 | 12:8,372,582-8,379,381 | - | C2H12g08323 | CX12g016852 | LOC_Os12g17420 | Os12g0273300 | - | Detail |
| C1H12g05701 | 12:8,399,801-8,402,074 | - | C2H12g24992 | CX12g016852 | LOC_Os12g17480 | Os12g0273266 | - | Detail |
| C1H12g00216 | 12:8,404,931-8,406,904 | - | C2H12g15566 | CX12g015082 | LOC_Os12g17490 | Os12g0273300 | - | Detail |
| C1H12g04747 | 12:8,408,517-8,409,308 | - | C2H12g27552 | CX12g016852 | LOC_Os12g17490 | Os12g0273300 | - | Detail |
| C1H12g24317 | 12:8,409,425-8,409,661 | - | - | - | - | - | - | Detail |
| C1H12g29461 | 12:8,416,744-8,421,042 | + | C2H12g29628 | CX12g018265 | LOC_Os12g17530 | Os12g0273700 | - | Detail |
| C1H12g16512 | 12:8,421,410-8,423,027 | + | C2H12g28185 | CX12g015080 | LOC_Os12g17540 | Os12g0273800 | - | Detail |
| C1H12g03669 | 12:8,427,757-8,433,574 | - | C2H12g20876 | CX12g017067 | LOC_Os12g17550 | Os12g0273900 | - | Detail |
| C1H12g00966 | 12:8,434,158-8,434,956 | + | C2H12g20856 | - | - | - | - | Detail |
| C1H12g25567 | 12:8,437,856-8,440,181 | - | C2H12g23675 | CX12g018314 | LOC_Os12g17570 | Os12g0274200 | - | Detail |
| C1H12g18773 | 12:8,452,609-8,456,256 | - | - | - | - | - | - | Detail |
| C1H12g06852 | 12:8,458,577-8,459,692 | - | C2H12g04054 | CX12g017062 | LOC_Os12g17600 | Os12g0291100 | - | Detail |
| C1H12g11802 | 12:8,493,648-8,494,348 | + | C2H12g06555 | - | - | Os12g0275500 | - | Detail |
| C1H12g04948 | 12:8,562,237-8,564,312 | - | C2H12g27001 | CX12g016181 | LOC_Os12g17830 | Os12g0276100 | - | Detail |
| C1H12g16114 | 12:8,564,801-8,565,679 | - | C2H12g14134 | CX12g015735 | LOC_Os12g17840 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g03508 | 5:7,583,049-7,583,942 | - | C1H5g21179 | CX5g038349 | LOC_Os05g15770 | Os05g0247100 | DIP3, XIP, OsHI-XIP | Detail |
| C2H5g09723 | 5:7,630,074-7,639,532 | - | C1H5g04227 | CX5g040966 | LOC_Os05g15890 | Os05g0247900 | OsCHR713, CHR713 | Detail |
| C2H5g16380 | 5:7,655,551-7,657,410 | - | C1H5g29560 | CX5g038055 | LOC_Os05g16000 | Os05g0249800 | - | Detail |
| C2H5g23841 | 5:7,670,803-7,671,060 | - | C1H5g10784 | CX5g038858 | LOC_Os05g16054 | Os05g0249100 | - | Detail |
| C2H5g02175 | 5:7,695,276-7,697,536 | - | C1H5g29560 | CX5g039101 | LOC_Os05g16100 | Os05g0249800 | - | Detail |
| C2H5g15350 | 5:7,707,412-7,710,911 | - | C1H5g23916 | CX5g039101 | LOC_Os05g16140 | Os05g0250000 | - | Detail |
| C2H5g06835 | 5:7,715,435-7,719,297 | - | C1H5g17383 | CX5g039101 | LOC_Os05g16240 | Os05g0250200 | - | Detail |
| C2H5g11862 | 5:7,723,279-7,726,185 | - | C1H5g19855 | CX5g041055 | LOC_Os05g16200 | Os05g0250700 | - | Detail |
| C2H5g27100 | 5:7,736,709-7,737,431 | - | - | - | - | - | - | Detail |
| C2H5g08541 | 5:7,756,996-7,758,426 | - | - | CX5g041082 | - | - | - | Detail |
| C2H5g10190 | 5:7,761,947-7,765,438 | - | C1H5g18798 | CX5g038245 | LOC_Os05g16200 | Os05g0250700 | - | Detail |
| C2H5g00039 | 5:7,788,239-7,791,656 | - | C1H5g13669 | - | - | - | - | Detail |
| C2H5g10863 | 5:7,791,689-7,792,726 | - | C1H5g13669 | CX5g039794 | LOC_Os05g16230 | Os05g0251200 | - | Detail |
| C2H5g12394 | 5:7,796,358-7,797,614 | - | C1H5g11478 | CX5g039447 | LOC_Os05g16240 | Os05g0251200 | - | Detail |
| C2H5g03213 | 5:7,799,407-7,803,760 | + | C1H5g13415 | CX5g038303 | LOC_Os05g16250 | Os05g0251400 | OsBVF1, P31<sup>comet</sup> | Detail |
| C2H5g18069 | 5:7,804,814-7,808,658 | + | C1H5g25482 | CX5g038303 | - | Os05g0251500 | - | Detail |
| C2H5g11253 | 5:7,812,460-7,816,343 | + | C1H5g22880 | CX5g037603 | - | - | - | Detail |
| C2H5g17103 | 5:7,813,545-7,819,371 | - | C1H5g03577 | CX5g040268 | LOC_Os05g16280 | Os05g0251900 | - | Detail |
| C2H5g24772 | 5:7,822,367-7,827,353 | - | C1H5g13508 | CX5g041044 | LOC_Os05g16290 | Os05g0252000 | - | Detail |
| C2H5g01822 | 5:7,838,754-7,840,413 | - | C1H5g26814 | CX5g037929 | LOC_Os05g16300 | Os05g0252100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |