| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27186 | 12:8,027,831-8,030,743 | - | - | - | - | - | - | Detail |
| C1H12g22810 | 12:8,032,441-8,033,926 | - | C2H3g23130 | - | - | - | - | Detail |
| C1H12g30337 | 12:8,046,615-8,050,263 | + | C2H12g15577 | CX12g015656 | LOC_Os12g16620 | - | - | Detail |
| C1H12g12690 | 12:8,062,533-8,063,063 | + | C2H12g13804 | CX12g016493 | LOC_Os12g16640 | Os12g0267100 | - | Detail |
| C1H12g01774 | 12:8,065,294-8,065,512 | - | - | - | - | - | - | Detail |
| C1H12g04576 | 12:8,065,437-8,074,333 | + | C2H12g25263 | CX12g016493 | LOC_Os12g16650 | Os12g0267200 | - | Detail |
| C1H12g20271 | 12:8,081,573-8,081,926 | + | - | - | - | - | - | Detail |
| C1H12g26358 | 12:8,081,955-8,082,293 | + | C2H12g29205 | CX12g015504 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| C1H12g26040 | 12:8,086,905-8,092,004 | - | C2H5g06041 | CX9g058196 | LOC_Os10g29274 | Os10g0428200 | - | Detail |
| C1H12g24303 | 12:8,098,217-8,098,549 | + | C2H12g22341 | CX12g016418 | LOC_Os12g16370 | - | - | Detail |
| C1H12g20439 | 12:8,103,063-8,105,960 | + | C2H12g01086 | CX12g016003 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| C1H12g24834 | 12:8,116,448-8,118,408 | - | C2H12g04535 | CX12g018224 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| C1H12g27646 | 12:8,194,063-8,199,131 | - | C2H12g04709 | CX12g016443 | LOC_Os12g17070 | - | - | Detail |
| C1H12g23758 | 12:8,214,290-8,217,091 | + | C2H12g27718 | CX12g015910 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |
| C1H12g29906 | 12:8,219,778-8,221,352 | - | C2H12g03089 | CX12g018649 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C1H12g00865 | 12:8,235,806-8,236,450 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17090 | Os12g0270675 | - | Detail |
| C1H12g14089 | 12:8,252,859-8,254,623 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17140 | Os12g0270675 | - | Detail |
| C1H12g01259 | 12:8,274,379-8,275,645 | - | - | - | - | - | - | Detail |
| C1H12g31898 | 12:8,277,268-8,279,819 | + | - | - | - | Os12g0231600 | - | Detail |
| C1H12g17449 | 12:8,295,784-8,297,542 | - | C2H12g14706 | CX12g017972 | LOC_Os12g17160 | Os12g0270900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g27863 | 3:23,729,695-23,730,839 | - | C1H3g24128 | - | LOC_Os03g45528 | Os03g0658000 | - | Detail |
| C2H3g11605 | 3:23,754,010-23,762,839 | - | C1H3g08032 | CX3g028381 | LOC_Os03g45619 | Os03g0658800 | - | Detail |
| C2H3g00843 | 3:23,790,799-23,791,254 | + | C1H3g00885 | CX3g029438 | LOC_Os03g45710 | Os03g0659200 | - | Detail |
| C2H3g07162 | 3:23,792,058-23,794,629 | - | C1H3g09830 | CX3g029511 | LOC_Os03g45720 | Os03g0659300 | - | Detail |
| C2H3g28770 | 3:23,795,429-23,800,874 | - | C1H3g25241 | CX3g026126 | LOC_Os03g45730 | Os03g0659400 | - | Detail |
| C2H3g01171 | 3:23,815,459-23,817,731 | + | C1H3g19695 | CX3g026935 | LOC_Os03g45750 | Os03g0659700 | - | Detail |
| C2H3g24902 | 3:23,818,228-23,821,088 | - | C1H3g28197 | CX3g026095 | LOC_Os03g45760 | Os03g0659800 | - | Detail |
| C2H3g00978 | 3:23,822,127-23,829,347 | - | C1H3g28109 | CX3g025786 | LOC_Os03g45770 | Os03g0659900 | - | Detail |
| C2H3g13984 | 3:23,836,673-23,837,032 | - | C1H3g20654 | CX3g025578 | LOC_Os03g45800 | Os03g0660400 | - | Detail |
| C2H3g15265 | 3:23,842,920-23,847,738 | - | C1H7g12901 | CX3g028827 | LOC_Os03g61860 | - | - | Detail |
| C2H3g28162 | 3:23,852,051-23,852,371 | + | C1H3g08111 | CX3g028895 | LOC_Os03g45830 | Os03g0660300 | - | Detail |
| C2H3g17830 | 3:23,859,993-23,860,301 | + | C1H3g26323 | CX3g028895 | LOC_Os03g45850 | Os03g0660400 | - | Detail |
| C2H3g00293 | 3:23,866,503-23,866,805 | + | C1H3g15531 | CX3g025578 | LOC_Os03g45860 | Os03g0660500 | - | Detail |
| C2H3g01118 | 3:23,884,414-23,885,723 | - | C1H3g22914 | CX3g026002 | LOC_Os03g45870 | Os03g0660700 | - | Detail |
| C2H3g16487 | 3:23,916,079-23,920,135 | + | C1H3g16718 | CX3g030219 | LOC_Os03g45920 | Os03g0661300 | TUB8, OsTUB8, TUBB8 | Detail |
| C2H3g01668 | 3:23,944,783-23,945,557 | - | C1H3g24127 | - | - | - | - | Detail |
| C2H3g29758 | 3:23,947,990-23,953,762 | + | C1H3g08409 | CX3g028179 | LOC_Os03g46040 | Os03g0663100 | - | Detail |
| C2H3g29429 | 3:23,955,175-23,955,855 | - | C1H3g13489 | CX3g030670 | LOC_Os03g46060 | Os03g0663400 | - | Detail |
| C2H3g20889 | 3:23,956,746-23,957,435 | - | C1H3g28997 | CX3g026067 | LOC_Os03g46070 | Os03g0663500 | - | Detail |
| C2H3g27587 | 3:23,979,186-23,984,211 | + | C1H3g12643 | CX3g030773 | LOC_Os03g46090 | Os03g0663700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |