| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27186 | 12:8,027,831-8,030,743 | - | - | - | - | - | - | Detail |
| C1H12g22810 | 12:8,032,441-8,033,926 | - | C2H3g23130 | - | - | - | - | Detail |
| C1H12g30337 | 12:8,046,615-8,050,263 | + | C2H12g15577 | CX12g015656 | LOC_Os12g16620 | - | - | Detail |
| C1H12g12690 | 12:8,062,533-8,063,063 | + | C2H12g13804 | CX12g016493 | LOC_Os12g16640 | Os12g0267100 | - | Detail |
| C1H12g01774 | 12:8,065,294-8,065,512 | - | - | - | - | - | - | Detail |
| C1H12g04576 | 12:8,065,437-8,074,333 | + | C2H12g25263 | CX12g016493 | LOC_Os12g16650 | Os12g0267200 | - | Detail |
| C1H12g20271 | 12:8,081,573-8,081,926 | + | - | - | - | - | - | Detail |
| C1H12g26358 | 12:8,081,955-8,082,293 | + | C2H12g29205 | CX12g015504 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| C1H12g26040 | 12:8,086,905-8,092,004 | - | C2H5g06041 | CX9g058196 | LOC_Os10g29274 | Os10g0428200 | - | Detail |
| C1H12g24303 | 12:8,098,217-8,098,549 | + | C2H12g22341 | CX12g016418 | LOC_Os12g16370 | - | - | Detail |
| C1H12g20439 | 12:8,103,063-8,105,960 | + | C2H12g01086 | CX12g016003 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| C1H12g24834 | 12:8,116,448-8,118,408 | - | C2H12g04535 | CX12g018224 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| C1H12g27646 | 12:8,194,063-8,199,131 | - | C2H12g04709 | CX12g016443 | LOC_Os12g17070 | - | - | Detail |
| C1H12g23758 | 12:8,214,290-8,217,091 | + | C2H12g27718 | CX12g015910 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |
| C1H12g29906 | 12:8,219,778-8,221,352 | - | C2H12g03089 | CX12g018649 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C1H12g00865 | 12:8,235,806-8,236,450 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17090 | Os12g0270675 | - | Detail |
| C1H12g14089 | 12:8,252,859-8,254,623 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17140 | Os12g0270675 | - | Detail |
| C1H12g01259 | 12:8,274,379-8,275,645 | - | - | - | - | - | - | Detail |
| C1H12g31898 | 12:8,277,268-8,279,819 | + | - | - | - | Os12g0231600 | - | Detail |
| C1H12g17449 | 12:8,295,784-8,297,542 | - | C2H12g14706 | CX12g017972 | LOC_Os12g17160 | Os12g0270900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g06755 | 9:9,337,649-9,338,483 | - | C1H9g27802 | CX9g057025 | LOC_Os09g17830 | Os09g0347700 | - | Detail |
| C2H9g21819 | 9:9,338,752-9,340,072 | - | C1H9g14906 | CX9g056471 | LOC_Os09g17870 | Os09g0347900 | - | Detail |
| C2H9g28813 | 9:9,347,060-9,358,828 | + | C1H9g17851 | CX9g055270 | LOC_Os09g17880 | Os09g0348400 | - | Detail |
| C2H9g04538 | 9:9,370,440-9,374,228 | + | C1H9g01869 | CX9g055010 | LOC_Os09g17910 | Os09g0348600 | - | Detail |
| C2H9g02814 | 9:9,374,722-9,377,673 | + | C1H9g20063 | CX9g055010 | LOC_Os09g17890 | Os09g0348600 | - | Detail |
| C2H9g23204 | 9:9,400,597-9,406,955 | + | C1H9g07181 | CX9g055660 | LOC_Os09g19380 | Os09g0358000 | - | Detail |
| C2H9g02888 | 9:9,410,880-9,411,698 | + | C1H9g20897 | CX9g057843 | LOC_Os09g18000 | Os09g0353200 | - | Detail |
| C2H9g22348 | 9:9,412,641-9,417,791 | + | C1H9g30901 | CX9g055803 | LOC_Os09g18010 | Os09g0349600 | - | Detail |
| C2H9g24613 | 9:9,420,242-9,422,694 | - | C1H9g13402 | CX9g058086 | LOC_Os09g18020 | Os09g0350900 | - | Detail |
| C2H9g16360 | 9:9,427,157-9,429,004 | - | C1H9g15429 | CX9g058086 | LOC_Os09g18020 | Os09g0349700 | - | Detail |
| C2H9g11607 | 9:9,441,521-9,441,886 | - | C1H9g17652 | CX9g055660 | LOC_Os09g17890 | Os09g0349800 | - | Detail |
| C2H9g25715 | 9:9,442,370-9,446,251 | - | C1H9g13402 | CX9g054841 | LOC_Os09g18020 | Os09g0351700 | - | Detail |
| C2H9g30424 | 9:9,446,327-9,449,475 | - | C1H9g30812 | CX9g054841 | LOC_Os09g18020 | Os09g0349700 | - | Detail |
| C2H9g22974 | 9:9,480,146-9,482,837 | - | C1H9g21112 | CX9g055660 | LOC_Os09g18159 | Os09g0350900 | - | Detail |
| C2H9g09080 | 9:9,483,313-9,486,949 | - | C1H9g05183 | CX9g055660 | LOC_Os09g18020 | Os09g0349700 | - | Detail |
| C2H9g07898 | 9:9,516,809-9,520,175 | - | C1H9g19942 | CX9g056907 | LOC_Os09g18159 | Os09g0350900 | - | Detail |
| C2H9g11163 | 9:9,524,732-9,531,707 | - | C1H9g05183 | CX9g056907 | LOC_Os09g18290 | Os09g0350900 | - | Detail |
| C2H9g14989 | 9:9,547,494-9,557,267 | - | C1H9g27029 | CX9g056592 | LOC_Os09g18230 | Os09g0351800 | - | Detail |
| C2H9g10780 | 9:9,580,968-9,584,040 | - | - | - | LOC_Os09g18250 | Os09g0351900 | - | Detail |
| C2H9g03446 | 9:9,588,667-9,594,125 | - | C1H9g30812 | CX9g055868 | LOC_Os09g18260 | Os09g0349700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |