| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27186 | 12:8,027,831-8,030,743 | - | - | - | - | - | - | Detail |
| C1H12g22810 | 12:8,032,441-8,033,926 | - | C2H3g23130 | - | - | - | - | Detail |
| C1H12g30337 | 12:8,046,615-8,050,263 | + | C2H12g15577 | CX12g015656 | LOC_Os12g16620 | - | - | Detail |
| C1H12g12690 | 12:8,062,533-8,063,063 | + | C2H12g13804 | CX12g016493 | LOC_Os12g16640 | Os12g0267100 | - | Detail |
| C1H12g01774 | 12:8,065,294-8,065,512 | - | - | - | - | - | - | Detail |
| C1H12g04576 | 12:8,065,437-8,074,333 | + | C2H12g25263 | CX12g016493 | LOC_Os12g16650 | Os12g0267200 | - | Detail |
| C1H12g20271 | 12:8,081,573-8,081,926 | + | - | - | - | - | - | Detail |
| C1H12g26358 | 12:8,081,955-8,082,293 | + | C2H12g29205 | CX12g015504 | LOC_Os12g16670 | Os12g0267500 | - | Detail |
| C1H12g26040 | 12:8,086,905-8,092,004 | - | C2H5g06041 | CX9g058196 | LOC_Os10g29274 | Os10g0428200 | - | Detail |
| C1H12g24303 | 12:8,098,217-8,098,549 | + | C2H12g22341 | CX12g016418 | LOC_Os12g16370 | - | - | Detail |
| C1H12g20439 | 12:8,103,063-8,105,960 | + | C2H12g01086 | CX12g016003 | LOC_Os12g16690 | Os12g0267900 | - | Detail |
| C1H12g24834 | 12:8,116,448-8,118,408 | - | C2H12g04535 | CX12g018224 | LOC_Os12g16720 | Os12g0268000 | SL, OsSL, CYP71P1, LLM1, CYP71A1, T5H | Detail |
| C1H12g27646 | 12:8,194,063-8,199,131 | - | C2H12g04709 | CX12g016443 | LOC_Os12g17070 | - | - | Detail |
| C1H12g23758 | 12:8,214,290-8,217,091 | + | C2H12g27718 | CX12g015910 | LOC_Os12g17080 | Os12g0270200 | OGR1, ogr1 | Detail |
| C1H12g29906 | 12:8,219,778-8,221,352 | - | C2H12g03089 | CX12g018649 | LOC_Os12g17090 | Os12g0270300 | - | Detail |
| C1H12g00865 | 12:8,235,806-8,236,450 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17090 | Os12g0270675 | - | Detail |
| C1H12g14089 | 12:8,252,859-8,254,623 | - | C2H12g03089 | CX12g016852 | LOC_Os12g17140 | Os12g0270675 | - | Detail |
| C1H12g01259 | 12:8,274,379-8,275,645 | - | - | - | - | - | - | Detail |
| C1H12g31898 | 12:8,277,268-8,279,819 | + | - | - | - | Os12g0231600 | - | Detail |
| C1H12g17449 | 12:8,295,784-8,297,542 | - | C2H12g14706 | CX12g017972 | LOC_Os12g17160 | Os12g0270900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g16209 | 6:21,031,084-21,036,179 | - | C1H6g27028 | CX6g045451 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| C2H6g15429 | 6:21,059,488-21,062,594 | + | C1H6g29420 | CX6g045565 | LOC_Os06g40360 | Os06g0605900 | - | Detail |
| C2H6g09935 | 6:21,065,008-21,070,880 | - | C1H6g17045 | CX6g042516 | LOC_Os06g40370 | Os06g0606000 | OsSOS2, OsCIPK24 | Detail |
| C2H6g14185 | 6:21,077,921-21,078,274 | + | - | CX6g044858 | - | - | - | Detail |
| C2H6g20919 | 6:21,093,037-21,093,483 | - | C1H6g09214 | CX6g042422 | - | Os06g0606401 | - | Detail |
| C2H6g09266 | 6:21,101,311-21,102,234 | + | C1H6g08688 | CX6g041925 | LOC_Os06g40440 | Os06g0606700 | - | Detail |
| C2H6g06153 | 6:21,102,643-21,107,459 | - | C1H6g08531 | CX6g042680 | LOC_Os06g40450 | Os06g0606800 | - | Detail |
| C2H6g24904 | 6:21,114,360-21,119,427 | + | C1H6g07459 | CX6g042473 | LOC_Os06g40460 | Os06g0606900 | - | Detail |
| C2H6g03860 | 6:21,131,803-21,134,999 | + | C1H6g05934 | CX6g042345 | LOC_Os06g40490 | Os06g0607000 | - | Detail |
| C2H6g09467 | 6:21,144,703-21,147,512 | + | C1H6g31396 | CX6g043327 | LOC_Os06g40500 | Os06g0607100 | OsLP1, PDCT | Detail |
| C2H6g12079 | 6:21,148,124-21,152,405 | - | C1H6g29722 | CX6g041503 | LOC_Os06g40510 | Os06g0607200 | OsSec14-17 | Detail |
| C2H6g21524 | 6:21,166,792-21,173,837 | + | C1H6g21024 | CX6g042337 | LOC_Os06g40550 | Os06g0607700 | ABCG15, OsABCG15 | Detail |
| C2H6g27095 | 6:21,175,762-21,179,751 | + | C1H6g28971 | CX6g041701 | LOC_Os06g40560 | Os06g0607800 | OsRpt4b | Detail |
| C2H6g14041 | 6:21,180,365-21,186,625 | + | C1H6g07985 | CX6g043288 | LOC_Os06g40570 | Os06g0607900 | Osnop | Detail |
| C2H6g21336 | 6:21,191,287-21,198,987 | - | C1H6g06738 | CX6g041284 | LOC_Os06g40590 | Os06g0608100 | - | Detail |
| C2H6g24273 | 6:21,199,925-21,205,736 | - | C1H6g22076 | CX6g044547 | LOC_Os06g40600 | Os06g0608300 | - | Detail |
| C2H6g17388 | 6:21,208,937-21,213,151 | + | C1H6g01423 | CX6g044120 | LOC_Os06g40620 | Os06g0608500 | OsSNF7 | Detail |
| C2H6g02272 | 6:21,214,233-21,217,246 | + | C1H6g30921 | CX6g041248 | LOC_Os06g40630 | Os06g0608600 | - | Detail |
| C2H6g07039 | 6:21,218,172-21,220,099 | + | C1H6g15681 | CX6g042521 | LOC_Os06g40640 | Os06g0608700 | OsAld-Y, YGDL-1, YGDL1 | Detail |
| C2H6g15713 | 6:21,220,421-21,225,443 | - | C1H6g06287 | CX6g042318 | LOC_Os06g40650 | Os06g0608800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |