| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g28895 | 12:7,776,683-7,781,017 | - | - | - | - | - | - | Detail |
| C1H12g11585 | 12:7,786,889-7,787,675 | + | - | CX12g016792 | - | - | - | Detail |
| C1H12g06062 | 12:7,797,322-7,800,333 | + | C2H12g09413 | CX12g015694 | LOC_Os12g16180 | Os12g0262700 | - | Detail |
| C1H12g13569 | 12:7,815,887-7,817,038 | - | C2H12g11104 | CX12g015586 | LOC_Os12g16200 | Os12g0528400 | OsGS3 | Detail |
| C1H12g05864 | 12:7,817,229-7,818,778 | - | C2H12g02448 | CX12g015586 | LOC_Os12g16200 | Os12g0263000 | OsGS2 | Detail |
| C1H12g05746 | 12:7,821,767-7,822,093 | - | C2H12g16204 | - | - | - | - | Detail |
| C1H12g04992 | 12:7,827,783-7,830,318 | - | C2H12g27104 | CX12g018598 | LOC_Os12g16210 | Os12g0263100 | - | Detail |
| C1H12g09178 | 12:7,832,881-7,836,763 | - | C2H12g18633 | CX12g017791 | LOC_Os12g16290 | Os12g0263200 | - | Detail |
| C1H12g06311 | 12:7,848,661-7,852,571 | - | C2H12g15305 | CX12g016766 | LOC_Os12g16410 | Os12g0263200 | - | Detail |
| C1H12g00526 | 12:7,870,200-7,874,710 | - | C2H12g24725 | CX12g018805 | LOC_Os12g16240 | Os12g0263600 | - | Detail |
| C1H12g16075 | 12:7,883,060-7,891,860 | - | C2H12g28072 | CX12g018805 | LOC_Os12g16240 | Os12g0263200 | - | Detail |
| C1H12g06116 | 12:7,910,914-7,911,952 | - | C2H12g16462 | CX12g015473 | LOC_Os12g16410 | Os12g0263200 | - | Detail |
| C1H12g26459 | 12:7,920,208-7,925,128 | + | - | - | - | - | - | Detail |
| C1H12g05249 | 12:7,926,718-7,939,522 | + | C2H12g03242 | CX12g016940 | LOC_Os12g16350 | - | - | Detail |
| C1H12g23481 | 12:7,964,009-7,967,477 | - | C2H12g21742 | CX12g016666 | LOC_Os12g16250 | Os12g0263600 | - | Detail |
| C1H12g19638 | 12:7,976,081-7,976,914 | - | C2H12g09837 | CX12g016756 | - | - | - | Detail |
| C1H12g31185 | 12:7,993,073-7,994,679 | - | C2H12g05917 | CX12g016907 | LOC_Os12g16520 | Os12g0614851 | - | Detail |
| C1H12g05455 | 12:8,003,778-8,004,596 | - | C2H12g24177 | - | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| C1H12g12669 | 12:8,004,628-8,005,467 | - | C2H12g24213 | CX12g016989 | LOC_Os12g16540 | Os12g0266200 | - | Detail |
| C1H12g19516 | 12:8,026,674-8,027,316 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g16452 | 3:33,046,539-33,047,911 | - | C1H3g04119 | CX3g031284 | LOC_Os03g64340 | Os03g0861400 | - | Detail |
| C2H3g12472 | 3:33,054,436-33,059,715 | - | C1H3g17429 | CX3g030656 | LOC_Os03g64350 | Os03g0861700 | - | Detail |
| C2H3g08959 | 3:33,059,879-33,062,631 | + | C1H3g24824 | CX3g028909 | LOC_Os03g64360 | Os03g0861800 | - | Detail |
| C2H3g16629 | 3:33,072,868-33,079,793 | + | C1H3g08341 | CX3g029193 | LOC_Os03g64400 | Os03g0862100 | - | Detail |
| C2H3g28738 | 3:33,082,826-33,084,731 | - | - | CX3g027325 | LOC_Os03g64415 | - | - | Detail |
| C2H4g04859 | 4:3,816-6,198 | + | C1H6g20714 | CX6g041752 | LOC_Os06g01840 | Os06g0107600 | - | Detail |
| C2H4g12961 | 4:6,554-8,915 | - | C1H6g26100 | CX6g042457 | LOC_Os06g01850 | Os06g0107700 | OsLFNR2, LFNR2, FNR | Detail |
| C2H4g04026 | 4:11,903-12,487 | - | - | CX6g041557 | LOC_Os06g01860 | Os06g0107800 | BPH29 | Detail |
| C2H4g21175 | 4:18,091-18,357 | + | C1H6g12285 | CX6g042594 | LOC_Os06g01890 | Os06g0108500 | - | Detail |
| C2H4g10486 | 4:20,285-22,820 | + | C1H6g01350 | CX6g042594 | LOC_Os06g01890 | Os06g0108500 | - | Detail |
| C2H4g22338 | 4:23,536-24,372 | - | - | CX6g042160 | LOC_Os06g01920 | Os06g0108600 | - | Detail |
| C2H4g13792 | 4:35,633-38,645 | + | C1H6g04390 | CX6g043309 | LOC_Os06g01934 | - | - | Detail |
| C2H4g26823 | 4:39,446-40,543 | - | - | CX6g041477 | LOC_Os06g01950 | Os06g0109000 | - | Detail |
| C2H4g18764 | 4:42,224-42,691 | - | - | CX6g041174 | LOC_Os06g01960 | Os06g0109100 | - | Detail |
| C2H4g20581 | 4:50,539-52,867 | - | C1H4g20758 | - | - | - | - | Detail |
| C2H4g20979 | 4:57,481-57,976 | - | C1H4g13734 | CX4g036368 | - | - | - | Detail |
| C2H4g12191 | 4:104,764-106,551 | - | C1H4g16035 | - | - | - | - | Detail |
| C2H4g13233 | 4:105,552-108,242 | + | C1H4g00861 | CX4g032894 | LOC_Os04g01070 | Os04g0100300 | - | Detail |
| C2H4g05647 | 4:152,099-161,042 | + | C1H4g00970 | CX4g034809 | LOC_Os04g01130 | Os04g0101300 | - | Detail |
| C2H4g16448 | 4:162,988-164,816 | - | C1H4g04170 | CX4g034027 | LOC_Os04g01140 | Os04g0101400 | CYP93G1, OsCYP93G1, OsFNSII, FNSII | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |