| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g26088 | 12:6,530,418-6,536,542 | + | C2H12g01967 | CX12g017625 | LOC_Os12g14070 | Os12g0244100 | - | Detail |
| C1H12g02592 | 12:6,542,186-6,544,409 | + | C2H12g23058 | CX12g016741 | LOC_Os12g14100 | Os12g0244400 | OsLHT2 | Detail |
| C1H12g04304 | 12:6,545,721-6,549,030 | - | C2H12g05045 | CX12g016624 | LOC_Os12g14110 | Os12g0244500 | - | Detail |
| C1H12g05837 | 12:6,555,326-6,556,490 | + | - | - | - | - | - | Detail |
| C1H12g05567 | 12:6,556,896-6,558,952 | + | C2H12g00893 | CX12g016736 | LOC_Os12g14140 | Os12g0245000 | - | Detail |
| C1H12g15817 | 12:6,565,874-6,569,035 | + | C2H12g00893 | CX12g016736 | LOC_Os12g14150 | Os12g0245100 | - | Detail |
| C1H12g03404 | 12:6,569,119-6,570,044 | + | - | - | - | - | - | Detail |
| C1H12g07600 | 12:6,659,819-6,662,721 | + | C2H12g21920 | CX12g016189 | LOC_Os12g14330 | Os12g0246700 | - | Detail |
| C1H12g09846 | 12:6,694,301-6,696,056 | + | C2H12g11124 | CX12g018035 | LOC_Os12g14440 | Os12g0247700 | OsJAC1 | Detail |
| C1H12g16101 | 12:6,713,190-6,729,553 | - | C2H12g11642 | CX12g017919 | LOC_Os12g14520 | Os12g0249900 | - | Detail |
| C1H12g14954 | 12:6,744,248-6,744,556 | + | C2H12g11757 | CX12g016028 | LOC_Os12g14540 | Os12g0248600 | - | Detail |
| C1H12g01574 | 12:6,857,208-6,875,544 | - | C2H12g14675 | CX12g016969 | LOC_Os12g15190 | Os12g0255200 | - | Detail |
| C1H12g10971 | 12:6,896,549-6,897,002 | + | C2H12g11814 | - | - | - | - | Detail |
| C1H12g21150 | 12:6,897,401-6,897,988 | + | C2H12g23111 | CX12g016059 | LOC_Os12g14580 | Os12g0249100 | OsTET15 | Detail |
| C1H12g18946 | 12:6,943,733-6,954,791 | - | C2H12g11642 | CX12g018022 | LOC_Os12g14520 | Os12g0249900 | - | Detail |
| C1H12g22496 | 12:6,974,214-6,974,555 | - | C2H12g18623 | CX12g018714 | - | - | - | Detail |
| C1H12g25021 | 12:7,166,926-7,168,476 | - | C2H12g00174 | CX12g017143 | - | - | - | Detail |
| C1H12g04637 | 12:7,184,723-7,187,051 | - | C2H12g12831 | CX12g016695 | - | - | - | Detail |
| C1H12g15591 | 12:7,188,302-7,198,355 | - | C2H12g27392 | - | - | Os12g0254400 | - | Detail |
| C1H12g02627 | 12:7,205,574-7,214,062 | + | C2H12g11209 | - | - | Os12g0254825 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g00290 | 1:5,680,263-5,680,658 | + | C1H1g09690 | CX1g005289 | LOC_Os01g11860 | Os01g0217500 | - | Detail |
| C2H1g04999 | 1:5,683,643-5,686,368 | + | C1H1g24673 | CX1g006272 | LOC_Os01g11880 | Os01g0217800 | - | Detail |
| C2H1g26585 | 1:5,694,890-5,706,732 | + | C1H1g21326 | CX1g006867 | LOC_Os01g11900 | Os01g0218032 | ROS1A, ROS1a, OsROS1, TA2 | Detail |
| C2H1g12652 | 1:5,714,986-5,715,949 | + | C1H1g12724 | CX1g003932 | LOC_Os01g11910 | Os01g0218100 | - | Detail |
| C2H1g17909 | 1:5,723,198-5,728,233 | + | C1H1g09961 | CX1g004539 | LOC_Os01g11920 | Os01g0218200 | - | Detail |
| C2H1g16216 | 1:5,735,888-5,738,164 | + | C1H8g13175 | CX1g006461 | LOC_Os01g18920 | - | - | Detail |
| C2H1g10690 | 1:5,744,235-5,749,317 | + | C1H1g30290 | CX1g000608 | LOC_Os01g11940 | Os01g0218500 | - | Detail |
| C2H1g22932 | 1:5,751,016-5,757,148 | - | C1H1g21863 | CX1g003540 | LOC_Os01g11946 | Os01g0218700 | - | Detail |
| C2H1g17937 | 1:5,757,524-5,770,829 | - | C1H1g28664 | CX1g000915 | LOC_Os01g11960 | Os01g0218900 | - | Detail |
| C2H1g09244 | 1:5,782,770-5,783,516 | + | C1H1g00514 | CX1g004702 | LOC_Os01g11970 | Os01g0219000 | - | Detail |
| C2H1g22718 | 1:5,784,729-5,786,591 | + | C1H1g27900 | CX1g003171 | LOC_Os01g11980 | Os01g0219100 | - | Detail |
| C2H1g24979 | 1:5,788,027-5,790,966 | + | C1H1g26992 | CX1g000508 | LOC_Os01g11990 | Os01g0219200 | ZYGO1 | Detail |
| C2H1g04486 | 1:5,794,028-5,794,585 | + | - | CX1g003538 | LOC_Os01g12000 | Os01g0219300 | - | Detail |
| C2H1g07180 | 1:5,800,293-5,800,649 | + | C1H1g22028 | CX1g005007 | LOC_Os01g12020 | Os01g0219500 | OsLTPL18 | Detail |
| C2H1g00052 | 1:5,801,729-5,804,473 | - | C1H1g09843 | CX1g005138 | LOC_Os01g12030 | Os01g0219600 | - | Detail |
| C2H1g03412 | 1:5,814,319-5,817,356 | - | C1H1g27823 | CX1g005599 | LOC_Os01g12070 | Os01g0220100 | OsCel9A | Detail |
| C2H1g01177 | 1:5,821,247-5,828,091 | - | C1H1g03057 | CX1g001222 | LOC_Os01g12080 | Os01g0220200 | - | Detail |
| C2H1g26925 | 1:5,835,272-5,838,341 | + | C1H1g21223 | CX1g003024 | LOC_Os01g12090 | Os01g0220300 | - | Detail |
| C2H1g24533 | 1:5,838,883-5,839,386 | - | C1H1g15416 | - | - | Os01g0220400 | - | Detail |
| C2H1g24521 | 1:5,842,627-5,843,755 | - | C1H1g25550 | CX1g004887 | LOC_Os01g12110 | Os01g0220500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |