| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g30081 | 12:6,152,106-6,159,939 | + | C2H12g20758 | CX12g016278 | LOC_Os12g13460 | Os12g0236900 | - | Detail |
| C1H12g28894 | 12:6,200,952-6,204,913 | + | C2H12g22982 | CX12g015143 | LOC_Os12g13550 | Os12g0237900 | - | Detail |
| C1H12g07915 | 12:6,210,331-6,219,228 | - | C2H12g23099 | CX12g015709 | LOC_Os12g13570 | Os12g0238000 | Os2R_MYB95 | Detail |
| C1H12g03439 | 12:6,231,519-6,245,121 | - | C2H12g29683 | CX12g017469 | LOC_Os12g13590 | Os12g0238100 | - | Detail |
| C1H12g12973 | 12:6,246,499-6,247,360 | - | C2H12g20204 | - | - | - | - | Detail |
| C1H12g05362 | 12:6,248,550-6,248,792 | - | C2H12g20204 | - | - | - | - | Detail |
| C1H12g28094 | 12:6,263,057-6,271,613 | + | C2H12g00674 | CX12g018069 | LOC_Os12g13640 | Os12g0238900 | - | Detail |
| C1H12g18734 | 12:6,295,358-6,296,327 | + | - | - | - | - | - | Detail |
| C1H12g23331 | 12:6,317,011-6,337,797 | - | C2H12g28113 | CX12g015652 | LOC_Os12g13660 | Os12g0239000 | - | Detail |
| C1H12g12697 | 12:6,348,837-6,349,109 | + | C2H12g21094 | CX12g017586 | - | Os07g0631500 | - | Detail |
| C1H12g15431 | 12:6,364,580-6,370,519 | - | C2H12g02650 | CX12g018347 | LOC_Os12g13720 | Os12g0239900 | - | Detail |
| C1H12g20502 | 12:6,371,098-6,373,093 | - | C2H12g23184 | CX12g018347 | LOC_Os12g13720 | Os12g0512700 | OsABCG50, OsPDR23, OsABCG50/PDR23 | Detail |
| C1H12g22587 | 12:6,375,285-6,376,344 | - | C2H12g05703 | - | - | - | - | Detail |
| C1H12g22302 | 12:6,428,051-6,432,963 | - | C2H12g12555 | CX12g016768 | LOC_Os12g13824 | Os12g0241100 | - | Detail |
| C1H12g10883 | 12:6,470,752-6,471,531 | - | C2H12g06713 | CX12g017347 | LOC_Os12g13890 | Os12g0242100 | - | Detail |
| C1H12g02106 | 12:6,474,510-6,475,333 | - | C2H12g28896 | CX12g016285 | LOC_Os12g13900 | Os12g0242200 | - | Detail |
| C1H12g25237 | 12:6,474,921-6,475,135 | + | - | - | - | - | - | Detail |
| C1H12g14554 | 12:6,486,100-6,487,107 | + | C2H12g16020 | CX12g016093 | LOC_Os12g13910 | Os12g0242500 | - | Detail |
| C1H12g01819 | 12:6,498,688-6,501,856 | + | C2H12g27977 | CX12g015195 | LOC_Os12g13930 | Os12g0242700 | - | Detail |
| C1H12g02837 | 12:6,505,323-6,510,014 | - | C2H12g19112 | CX12g016080 | LOC_Os12g13950 | Os12g0242900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g18005 | 4:28,958,297-28,965,623 | + | C1H4g30184 | CX4g031899 | LOC_Os04g56290 | Os04g0658000 | - | Detail |
| C2H4g01069 | 4:28,968,608-28,969,891 | + | - | CX4g031896 | LOC_Os04g56300 | Os04g0658100 | - | Detail |
| C2H4g30081 | 4:28,972,092-28,975,955 | - | C1H4g18631 | - | LOC_Os04g56309 | Os04g0658200 | - | Detail |
| C2H4g07943 | 4:28,977,845-28,982,005 | - | C1H4g22426 | CX4g035564 | LOC_Os04g56320 | Os04g0658300 | - | Detail |
| C2H4g15217 | 4:28,982,958-28,984,877 | + | C1H4g02567 | CX4g034664 | LOC_Os04g56330 | Os04g0658400 | - | Detail |
| C2H4g30309 | 4:28,988,221-28,989,894 | - | - | CX4g033328 | LOC_Os04g56350 | Os04g0658600 | - | Detail |
| C2H4g01057 | 4:28,991,734-28,993,491 | + | C1H4g14487 | CX4g032825 | LOC_Os04g56360 | Os04g0658700 | - | Detail |
| C2H4g20129 | 4:29,001,852-29,002,121 | - | - | - | LOC_Os04g56370 | Os04g0658800 | - | Detail |
| C2H4g03523 | 4:29,011,279-29,011,864 | + | C1H4g05647 | CX4g035898 | LOC_Os04g56390 | Os04g0659000 | - | Detail |
| C2H4g04887 | 4:29,012,440-29,016,377 | - | C1H4g10806 | CX4g036192 | LOC_Os04g56400 | Os04g0659100 | - | Detail |
| C2H4g04584 | 4:29,017,490-29,020,303 | - | C1H4g14313 | CX4g033838 | LOC_Os04g56405 | Os04g0659150 | - | Detail |
| C2H4g03636 | 4:29,021,964-29,027,624 | + | - | - | - | - | - | Detail |
| C2H4g18642 | 4:29,029,029-29,029,805 | + | C1H4g18497 | - | LOC_Os04g56430 | Os04g0659300 | OsRMC, OsRLK, OsDUF26 | Detail |
| C2H4g27064 | 4:29,030,558-29,034,807 | + | C1H4g07874 | CX4g035777 | LOC_Os04g56440 | Os04g0659400 | - | Detail |
| C2H4g24328 | 4:29,035,159-29,039,250 | - | C1H4g27386 | CX4g036481 | LOC_Os04g56450 | Os04g0659500 | - | Detail |
| C2H4g10685 | 4:29,041,839-29,042,900 | + | C1H4g14580 | - | LOC_Os04g56460 | Os04g0625600 | - | Detail |
| C2H4g12106 | 4:29,044,518-29,046,873 | + | C1H4g18216 | CX4g034160 | LOC_Os04g56470 | Os04g0659800 | OsAAP14 | Detail |
| C2H4g12958 | 4:29,047,404-29,055,003 | + | C1H4g27663 | CX4g035966 | LOC_Os04g56480 | Os04g0659900 | LML1, OsPELOTA, splHM47, spl<sup>HM47</sup> | Detail |
| C2H4g09310 | 4:29,058,703-29,059,029 | + | - | CX4g033578 | LOC_Os04g56490 | Os04g0660000 | - | Detail |
| C2H4g03651 | 4:29,065,815-29,066,423 | - | - | CX4g032744 | LOC_Os04g56500 | Os04g0660100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |