| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g30081 | 12:6,152,106-6,159,939 | + | C2H12g20758 | CX12g016278 | LOC_Os12g13460 | Os12g0236900 | - | Detail |
| C1H12g28894 | 12:6,200,952-6,204,913 | + | C2H12g22982 | CX12g015143 | LOC_Os12g13550 | Os12g0237900 | - | Detail |
| C1H12g07915 | 12:6,210,331-6,219,228 | - | C2H12g23099 | CX12g015709 | LOC_Os12g13570 | Os12g0238000 | Os2R_MYB95 | Detail |
| C1H12g03439 | 12:6,231,519-6,245,121 | - | C2H12g29683 | CX12g017469 | LOC_Os12g13590 | Os12g0238100 | - | Detail |
| C1H12g12973 | 12:6,246,499-6,247,360 | - | C2H12g20204 | - | - | - | - | Detail |
| C1H12g05362 | 12:6,248,550-6,248,792 | - | C2H12g20204 | - | - | - | - | Detail |
| C1H12g28094 | 12:6,263,057-6,271,613 | + | C2H12g00674 | CX12g018069 | LOC_Os12g13640 | Os12g0238900 | - | Detail |
| C1H12g18734 | 12:6,295,358-6,296,327 | + | - | - | - | - | - | Detail |
| C1H12g23331 | 12:6,317,011-6,337,797 | - | C2H12g28113 | CX12g015652 | LOC_Os12g13660 | Os12g0239000 | - | Detail |
| C1H12g12697 | 12:6,348,837-6,349,109 | + | C2H12g21094 | CX12g017586 | - | Os07g0631500 | - | Detail |
| C1H12g15431 | 12:6,364,580-6,370,519 | - | C2H12g02650 | CX12g018347 | LOC_Os12g13720 | Os12g0239900 | - | Detail |
| C1H12g20502 | 12:6,371,098-6,373,093 | - | C2H12g23184 | CX12g018347 | LOC_Os12g13720 | Os12g0512700 | OsABCG50, OsPDR23, OsABCG50/PDR23 | Detail |
| C1H12g22587 | 12:6,375,285-6,376,344 | - | C2H12g05703 | - | - | - | - | Detail |
| C1H12g22302 | 12:6,428,051-6,432,963 | - | C2H12g12555 | CX12g016768 | LOC_Os12g13824 | Os12g0241100 | - | Detail |
| C1H12g10883 | 12:6,470,752-6,471,531 | - | C2H12g06713 | CX12g017347 | LOC_Os12g13890 | Os12g0242100 | - | Detail |
| C1H12g02106 | 12:6,474,510-6,475,333 | - | C2H12g28896 | CX12g016285 | LOC_Os12g13900 | Os12g0242200 | - | Detail |
| C1H12g25237 | 12:6,474,921-6,475,135 | + | - | - | - | - | - | Detail |
| C1H12g14554 | 12:6,486,100-6,487,107 | + | C2H12g16020 | CX12g016093 | LOC_Os12g13910 | Os12g0242500 | - | Detail |
| C1H12g01819 | 12:6,498,688-6,501,856 | + | C2H12g27977 | CX12g015195 | LOC_Os12g13930 | Os12g0242700 | - | Detail |
| C1H12g02837 | 12:6,505,323-6,510,014 | - | C2H12g19112 | CX12g016080 | LOC_Os12g13950 | Os12g0242900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g06886 | 6:16,727,624-16,728,553 | - | C1H6g09449 | CX6g041753 | LOC_Os06g32910 | Os06g0520733 | - | Detail |
| C2H6g19136 | 6:16,749,518-16,750,569 | + | C1H6g11545 | CX6g042633 | LOC_Os06g32960 | Os06g0521400 | - | Detail |
| C2H6g01968 | 6:16,753,511-16,754,597 | - | C1H6g21195 | CX6g042633 | LOC_Os06g32980 | Os06g0521400 | - | Detail |
| C2H6g01283 | 6:16,767,249-16,768,415 | - | C1H6g30243 | CX6g042633 | LOC_Os06g32990 | Os06g0521500 | - | Detail |
| C2H6g06367 | 6:16,782,979-16,784,088 | - | C1H6g20726 | CX6g042633 | LOC_Os06g33080 | Os06g0522100 | - | Detail |
| C2H6g19763 | 6:16,794,792-16,795,902 | - | C1H6g20821 | CX6g042633 | LOC_Os06g33080 | Os06g0522100 | - | Detail |
| C2H6g16352 | 6:16,806,767-16,807,863 | - | C1H6g29917 | CX6g042633 | LOC_Os06g33100 | Os06g0522100 | - | Detail |
| C2H6g09426 | 6:16,827,776-16,828,198 | + | C1H6g21433 | CX6g045503 | LOC_Os06g33130 | - | - | Detail |
| C2H6g09034 | 6:16,845,922-16,849,259 | + | C1H6g11526 | - | - | - | - | Detail |
| C2H6g05346 | 6:16,868,701-16,873,657 | - | C1H6g13325 | CX6g045838 | LOC_Os06g33210 | Os06g0523400 | - | Detail |
| C2H6g30031 | 6:16,915,430-16,918,877 | + | C1H6g02067 | CX6g043726 | LOC_Os06g33250 | Os06g0523900 | - | Detail |
| C2H6g05593 | 6:16,934,838-16,940,909 | + | C1H6g05613 | CX6g044960 | LOC_Os06g33320 | Os06g0524300 | - | Detail |
| C2H6g01128 | 6:16,950,618-16,953,277 | + | C1H6g17546 | CX6g042169 | LOC_Os06g33330 | Os06g0524400 | - | Detail |
| C2H6g15987 | 6:16,962,706-16,964,919 | - | C1H6g15247 | CX6g044488 | LOC_Os06g33350 | Os06g0524700 | - | Detail |
| C2H6g22475 | 6:17,007,368-17,009,703 | + | C1H6g26812 | CX6g041941 | LOC_Os06g33360 | Os06g0524900 | - | Detail |
| C2H6g19720 | 6:17,014,376-17,018,379 | - | C1H6g26740 | CX6g042218 | LOC_Os06g33340 | Os06g0525000 | - | Detail |
| C2H6g10591 | 6:17,049,203-17,053,126 | + | C1H6g11127 | CX6g041250 | LOC_Os06g33450 | Os06g0526100 | OsSPCH1 | Detail |
| C2H6g09722 | 6:17,066,246-17,069,251 | - | - | - | - | Os06g0526350 | - | Detail |
| C2H6g25956 | 6:17,079,319-17,082,518 | - | C1H6g01850 | CX6g041558 | LOC_Os06g33480 | Os06g0526400 | - | Detail |
| C2H6g14289 | 6:17,084,819-17,087,382 | - | C1H6g24388 | CX6g041995 | LOC_Os06g33490 | Os06g0526466 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |