| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27783 | 12:5,808,151-5,811,070 | + | C2H12g11802 | CX12g015182 | LOC_Os12g12934 | Os12g0231000 | - | Detail |
| C1H12g09503 | 12:5,813,239-5,813,606 | - | C2H12g17603 | CX12g017485 | LOC_Os12g12950 | Os12g0231100 | - | Detail |
| C1H12g03361 | 12:5,817,630-5,818,106 | - | C2H12g09909 | CX12g017485 | LOC_Os12g12950 | Os12g0231100 | - | Detail |
| C1H12g19002 | 12:5,883,155-5,885,064 | + | C2H12g04910 | CX12g018016 | LOC_Os12g13030 | Os12g0232300 | - | Detail |
| C1H12g02294 | 12:5,941,098-5,942,330 | + | C2H12g05495 | CX12g017149 | LOC_Os12g13100 | Os12g0233100 | - | Detail |
| C1H12g31016 | 12:5,952,659-5,956,806 | + | C2H12g16229 | CX12g017163 | LOC_Os12g13120 | Os12g0233300 | - | Detail |
| C1H12g01177 | 12:5,958,898-5,962,698 | + | C2H12g13043 | CX12g017369 | LOC_Os12g13130 | Os12g0233400 | - | Detail |
| C1H12g26835 | 12:5,967,212-5,978,196 | + | C2H12g28935 | CX12g015729 | LOC_Os12g13150 | Os12g0233600 | - | Detail |
| C1H12g15768 | 12:5,982,105-5,988,061 | - | C2H12g08043 | CX12g015385 | LOC_Os12g13170 | Os12g0233800 | OsbZIP86 | Detail |
| C1H12g29590 | 12:5,998,834-6,000,429 | + | C2H12g00567 | CX12g018305 | LOC_Os12g13300 | Os12g0235700 | - | Detail |
| C1H12g16968 | 12:6,005,967-6,006,761 | + | C2H12g07252 | CX12g018317 | LOC_Os12g13300 | Os12g0235700 | - | Detail |
| C1H12g00468 | 12:6,009,625-6,013,882 | + | C2H12g19498 | CX12g016412 | LOC_Os12g13320 | Os12g0235800 | - | Detail |
| C1H12g14232 | 12:6,015,588-6,021,751 | - | C2H12g10550 | CX12g017502 | LOC_Os12g13340 | Os12g0236100 | - | Detail |
| C1H12g02575 | 12:6,042,364-6,045,338 | + | C2H12g24672 | - | - | - | - | Detail |
| C1H12g02611 | 12:6,054,296-6,054,715 | + | C2H12g28303 | - | - | - | - | Detail |
| C1H12g24731 | 12:6,091,586-6,095,474 | + | C2H12g10652 | CX12g015978 | LOC_Os12g13380 | Os12g0236400 | OsAK3 | Detail |
| C1H12g02931 | 12:6,099,665-6,104,884 | - | C2H12g16388 | CX12g015221 | LOC_Os12g13390 | Os12g0236500 | - | Detail |
| C1H12g03078 | 12:6,113,911-6,115,041 | + | C2H12g18961 | CX12g016671 | LOC_Os12g13400 | Os12g0236600 | - | Detail |
| C1H12g26733 | 12:6,134,211-6,140,925 | + | C2H12g29357 | CX12g018600 | LOC_Os12g13440 | Os12g0236700 | - | Detail |
| C1H12g02241 | 12:6,145,671-6,146,556 | - | C2H12g07357 | - | LOC_Os12g13445 | Os12g0236800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g25284 | 4:26,053,158-26,054,280 | - | C1H4g15893 | CX4g035889 | LOC_Os04g51140 | Os04g0600100 | - | Detail |
| C2H4g12319 | 4:26,054,891-26,057,188 | - | C1H4g02523 | CX4g035681 | LOC_Os04g51150 | Os04g0600200 | AOX1A, Ao1-1, AOX1a, OsAOX1a, AOX 1a | Detail |
| C2H4g13155 | 4:26,057,959-26,060,860 | - | C1H4g06092 | CX4g036218 | LOC_Os04g51160 | Os04g0600300 | AOX1B, AOX1b, OsAOX1b | Detail |
| C2H4g11382 | 4:26,062,604-26,064,996 | - | C1H4g28733 | CX4g036257 | LOC_Os04g51166 | Os04g0600400 | - | Detail |
| C2H4g16073 | 4:26,065,855-26,071,021 | - | C1H4g04973 | CX4g033183 | LOC_Os04g51172 | Os04g0600500 | OsBRXL3 | Detail |
| C2H4g00138 | 4:26,079,042-26,083,754 | - | C1H4g07853 | CX4g032625 | LOC_Os04g51180 | Os04g0600800 | COLD1 | Detail |
| C2H4g09942 | 4:26,085,183-26,089,337 | - | C1H4g08504 | CX4g033956 | LOC_Os04g51190 | Os04g0574500 | - | Detail |
| C2H4g25560 | 4:26,102,155-26,103,523 | - | C1H4g18677 | CX4g032272 | LOC_Os04g51240 | Os04g0601400 | - | Detail |
| C2H4g10254 | 4:26,104,987-26,107,216 | - | C1H4g11359 | CX4g033025 | LOC_Os04g51250 | Os04g0601500 | - | Detail |
| C2H4g14874 | 4:26,106,519-26,110,669 | + | C1H4g26178 | CX4g034624 | LOC_Os04g51260 | Os04g0602000 | - | Detail |
| C2H4g01351 | 4:26,111,323-26,112,177 | - | C1H4g02715 | CX4g036413 | LOC_Os04g51270 | Os04g0601700 | - | Detail |
| C2H4g08450 | 4:26,113,702-26,115,692 | + | C1H4g04277 | - | LOC_Os04g51280 | Os04g0601800 | WSP1 | Detail |
| C2H4g18195 | 4:26,116,346-26,119,282 | + | C1H4g31358 | CX4g031538 | LOC_Os04g51300 | Os04g0602100 | - | Detail |
| C2H4g21768 | 4:26,119,417-26,121,708 | - | C1H4g26391 | CX4g033882 | LOC_Os04g51310 | Os04g0602200 | - | Detail |
| C2H4g22043 | 4:26,123,267-26,125,534 | - | C1H4g19881 | CX4g033318 | LOC_Os04g51320 | Os04g0602300 | - | Detail |
| C2H4g12426 | 4:26,127,370-26,131,567 | - | C1H4g05144 | CX4g034293 | LOC_Os04g51330 | Os04g0602400 | - | Detail |
| C2H4g05437 | 4:26,134,548-26,138,254 | + | C1H4g22875 | CX4g033998 | LOC_Os04g51340 | Os04g0602500 | - | Detail |
| C2H4g15861 | 4:26,139,791-26,142,202 | + | C1H4g12838 | CX4g032956 | LOC_Os04g51350 | Os04g0602600 | MPR25 | Detail |
| C2H4g20183 | 4:26,143,347-26,145,256 | - | C1H4g06807 | CX4g034077 | LOC_Os04g51360 | Os04g0602700 | - | Detail |
| C2H4g18022 | 4:26,146,411-26,154,053 | - | C1H4g07013 | CX4g035673 | LOC_Os04g51370 | Os04g0602800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |