| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g26579 | 12:5,578,812-5,581,036 | + | C2H12g18820 | - | LOC_Os12g12560 | Os12g0226700 | - | Detail |
| C1H12g16368 | 12:5,582,181-5,584,432 | + | C2H12g09432 | - | LOC_Os12g12580 | Os12g0226900 | - | Detail |
| C1H12g00370 | 12:5,604,557-5,604,904 | + | C2H12g24890 | - | LOC_Os12g12590 | Os12g0227400 | - | Detail |
| C1H12g26630 | 12:5,606,853-5,610,587 | + | C2H12g24890 | - | LOC_Os12g12590 | Os12g0227400 | - | Detail |
| C1H12g08426 | 12:5,619,337-5,620,213 | + | C2H12g19673 | CX12g018552 | LOC_Os12g12600 | Os12g0227500 | - | Detail |
| C1H12g28501 | 12:5,633,338-5,633,764 | + | - | - | - | Os12g0228300 | - | Detail |
| C1H12g15488 | 12:5,634,049-5,634,816 | + | - | - | - | - | - | Detail |
| C1H12g30155 | 12:5,639,996-5,641,118 | + | C2H12g00009 | CX12g017591 | LOC_Os12g12650 | Os12g0228350 | - | Detail |
| C1H12g14955 | 12:5,641,263-5,644,673 | + | C2H12g02783 | CX12g016061 | LOC_Os12g12650 | Os12g0228350 | - | Detail |
| C1H12g25826 | 12:5,646,300-5,651,771 | - | C2H12g08487 | CX12g016191 | LOC_Os12g12664 | Os12g0277500 | - | Detail |
| C1H12g17343 | 12:5,662,818-5,663,208 | - | C2H12g05088 | - | - | - | - | Detail |
| C1H12g00282 | 12:5,668,281-5,669,163 | + | - | - | - | - | - | Detail |
| C1H12g13584 | 12:5,677,690-5,683,261 | - | C2H12g08487 | CX12g016191 | LOC_Os12g12664 | Os12g0277500 | - | Detail |
| C1H12g06640 | 12:5,695,470-5,696,951 | + | C2H12g20841 | CX12g016630 | LOC_Os12g12720 | Os12g0228700 | - | Detail |
| C1H12g03663 | 12:5,706,626-5,713,488 | - | C2H12g00687 | CX12g018551 | LOC_Os12g12740 | Os12g0228900 | - | Detail |
| C1H12g01330 | 12:5,718,712-5,724,494 | + | C2H12g05931 | CX12g015569 | LOC_Os12g12810 | Os12g0229600 | - | Detail |
| C1H12g30219 | 12:5,737,917-5,743,712 | - | C2H12g02152 | CX12g016595 | LOC_Os12g12850 | Os12g0230100 | - | Detail |
| C1H12g00088 | 12:5,755,464-5,758,556 | + | C2H12g24194 | CX12g017494 | LOC_Os12g12860 | Os12g0230200 | OsCPK29 | Detail |
| C1H12g25079 | 12:5,771,977-5,772,762 | + | C2H12g30377 | CX12g015159 | LOC_Os12g12880 | Os12g0230600 | - | Detail |
| C1H12g18925 | 12:5,806,529-5,808,132 | + | C2H12g11802 | - | LOC_Os12g12934 | Os12g0231000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03424 | 6:24,408,283-24,409,997 | - | C1H6g04835 | CX6g042765 | LOC_Os06g46030 | Os06g0672400 | OsG1L2 | Detail |
| C2H6g12858 | 6:24,422,938-24,423,922 | - | - | - | - | - | - | Detail |
| C2H6g07492 | 6:24,427,959-24,428,420 | - | C1H6g06589 | CX6g042065 | - | Os06g0531000 | - | Detail |
| C2H6g20505 | 6:24,434,698-24,435,501 | - | C1H6g00429 | - | LOC_Os06g46120 | Os06g0673300 | - | Detail |
| C2H6g02105 | 6:24,435,643-24,437,220 | + | - | CX6g042455 | - | - | - | Detail |
| C2H6g16269 | 6:24,436,756-24,439,505 | - | C1H6g04560 | CX6g044377 | LOC_Os06g46120 | Os06g0672700 | - | Detail |
| C2H6g04402 | 6:24,445,673-24,446,671 | - | C1H6g09876 | - | LOC_Os06g46065 | Os06g0672801 | - | Detail |
| C2H6g03521 | 6:24,470,199-24,470,987 | - | C1H6g06204 | CX6g042629 | - | Os06g0674000 | - | Detail |
| C2H6g03862 | 6:24,492,016-24,494,187 | - | C1H6g14950 | CX6g044991 | - | Os06g0674000 | - | Detail |
| C2H6g02186 | 6:24,583,163-24,583,878 | + | - | - | - | - | - | Detail |
| C2H6g00947 | 6:24,634,534-24,639,823 | + | C1H6g03179 | CX6g041920 | LOC_Os06g46240 | Os06g0674800 | - | Detail |
| C2H6g16522 | 6:24,662,696-24,666,303 | + | C1H6g03218 | CX6g042717 | LOC_Os06g46270 | Os06g0675600 | OsY37, ONAC011 | Detail |
| C2H6g30405 | 6:24,669,913-24,680,390 | - | C1H6g29534 | CX6g042747 | LOC_Os06g46284 | Os06g0675700 | ONG3 | Detail |
| C2H6g20637 | 6:24,681,360-24,687,204 | - | C1H6g05961 | CX6g043872 | LOC_Os06g46310 | Os06g0676000 | NRAMP3, OsNramp3, OsNRAMP3 | Detail |
| C2H6g24034 | 6:24,708,566-24,710,624 | - | C1H6g12474 | CX6g042075 | LOC_Os06g46330 | Os06g0676600 | - | Detail |
| C2H6g04890 | 6:24,719,088-24,723,422 | + | C1H6g29534 | CX6g041293 | LOC_Os06g46340 | Os06g0676700 | - | Detail |
| C2H6g08388 | 6:24,728,689-24,734,073 | - | C1H6g30642 | CX6g042639 | LOC_Os06g46350 | Os06g0677000 | DEP3, OspPLAIIIδ | Detail |
| C2H6g24564 | 6:24,755,079-24,759,465 | + | C1H6g11720 | CX6g043789 | LOC_Os06g46366 | Os06g0677300 | - | Detail |
| C2H6g27620 | 6:24,760,581-24,763,915 | + | C1H6g31002 | CX6g045150 | LOC_Os06g46372 | Os06g0677400 | - | Detail |
| C2H6g16974 | 6:24,765,283-24,769,704 | + | C1H6g05901 | CX6g042145 | LOC_Os06g46380 | Os06g0677500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |