| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g20628 | 12:4,940,952-4,944,703 | + | C2H12g03231 | CX12g017375 | LOC_Os12g10540 | Os12g0207000 | OsMADS13 | Detail |
| C1H12g06590 | 12:4,945,861-4,948,546 | + | C2H12g03303 | CX12g017375 | LOC_Os12g10550 | Os12g0207200 | - | Detail |
| C1H12g28035 | 12:4,951,596-4,955,498 | + | C2H12g11349 | CX12g016297 | LOC_Os12g10560 | Os12g0207300 | - | Detail |
| C1H12g14134 | 12:4,975,389-4,979,855 | - | C2H12g00454 | CX12g016832 | LOC_Os12g10640 | Os12g0209000 | - | Detail |
| C1H12g20126 | 12:4,985,183-4,987,190 | + | C2H12g03167 | CX12g017848 | LOC_Os12g10650 | Os12g0209100 | - | Detail |
| C1H12g08359 | 12:4,990,938-4,993,329 | + | C2H12g07296 | CX12g018182 | LOC_Os12g10660 | Os12g0209200 | - | Detail |
| C1H12g26070 | 12:4,993,918-5,004,307 | - | C2H12g07494 | CX12g016116 | LOC_Os12g10670 | Os12g0209300 | - | Detail |
| C1H12g25584 | 12:5,025,337-5,033,174 | + | C2H12g24281 | CX12g016275 | LOC_Os12g10700 | Os12g0209700 | - | Detail |
| C1H12g04109 | 12:5,034,044-5,045,982 | - | C2H12g16222 | CX12g015857 | LOC_Os12g10710 | Os12g0209800 | - | Detail |
| C1H12g13966 | 12:5,051,713-5,056,129 | + | C2H12g11181 | CX12g015356 | LOC_Os12g10720 | Os12g0210200 | OsGSTZ1 | Detail |
| C1H12g14959 | 12:5,059,753-5,063,010 | + | C2H12g23052 | CX12g017934 | LOC_Os12g10730 | Os12g0210300 | OsGSTZ2 | Detail |
| C1H12g28216 | 12:5,065,151-5,072,012 | + | C2H12g22614 | CX12g018439 | LOC_Os12g10740 | Os12g0210400 | RIR1 | Detail |
| C1H12g23522 | 12:5,074,652-5,075,945 | - | C2H12g18765 | CX12g018505 | LOC_Os12g10750 | Os12g0210500 | - | Detail |
| C1H12g11850 | 12:5,097,831-5,104,042 | + | C2H12g01604 | CX12g015352 | LOC_Os12g10784 | Os12g0210800 | - | Detail |
| C1H12g04913 | 12:5,106,938-5,107,282 | + | C2H12g24648 | CX12g017407 | LOC_Os12g10820 | Os12g0211000 | - | Detail |
| C1H12g12212 | 12:5,107,774-5,109,806 | + | C2H12g26558 | CX12g017407 | LOC_Os12g10810 | Os12g0211000 | - | Detail |
| C1H12g22331 | 12:5,116,136-5,119,136 | + | C2H12g10269 | CX12g017438 | LOC_Os12g10910 | Os12g0211400 | - | Detail |
| C1H12g03623 | 12:5,121,392-5,121,862 | - | C2H12g12998 | CX12g015302 | LOC_Os12g11930 | Os12g0211500 | - | Detail |
| C1H12g08850 | 12:5,122,421-5,125,468 | - | C2H12g02157 | CX12g015441 | LOC_Os12g11930 | Os12g0215950 | - | Detail |
| C1H12g16830 | 12:5,236,409-5,240,672 | + | C2H12g01684 | - | - | Os12g0216000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g28186 | 12:15,688,590-15,689,000 | + | C1H12g10430 | CX12g016935 | - | - | - | Detail |
| C2H12g05017 | 12:15,693,018-15,695,061 | - | C1H12g25761 | CX12g015464 | LOC_Os12g30824 | Os12g0491800 | OsTPS21, OsKSL6 | Detail |
| C2H12g00678 | 12:15,698,377-15,699,932 | - | C1H12g01833 | CX12g015464 | LOC_Os12g30800 | Os12g0491800 | OsTPS21, OsKSL6 | Detail |
| C2H12g08859 | 12:15,710,763-15,716,393 | - | C1H12g08021 | CX12g015671 | LOC_Os12g30824 | Os12g0491800 | OsTPS21, OsKSL6 | Detail |
| C2H12g27134 | 12:15,720,440-15,724,214 | - | C1H12g11684 | CX12g015464 | LOC_Os12g30824 | Os12g0491800 | OsTPS21, OsKSL6 | Detail |
| C2H12g07419 | 12:15,772,807-15,774,924 | + | C1H12g27496 | CX12g015363 | LOC_Os12g30920 | Os12g0492900 | - | Detail |
| C2H12g24982 | 12:15,789,252-15,789,557 | - | C1H12g02734 | CX12g015747 | LOC_Os12g30960 | - | - | Detail |
| C2H12g28730 | 12:15,797,585-15,802,951 | - | C1H12g11188 | CX12g015611 | LOC_Os12g30990 | Os12g0492900 | - | Detail |
| C2H12g23449 | 12:15,806,665-15,808,861 | + | C1H12g02587 | CX12g018315 | LOC_Os12g31000 | Os12g0493900 | - | Detail |
| C2H12g01730 | 12:15,918,545-15,922,955 | + | C1H12g21564 | CX12g018451 | LOC_Os12g31160 | Os12g0495600 | - | Detail |
| C2H12g24706 | 12:15,964,186-15,964,877 | - | C1H12g00470 | - | - | - | - | Detail |
| C2H12g15598 | 12:15,992,681-15,994,525 | - | C1H12g24169 | CX12g015200 | LOC_Os12g31200 | Os12g0495800 | - | Detail |
| C2H12g30578 | 12:15,995,866-15,996,717 | - | C1H12g08326 | CX12g015200 | LOC_Os12g31200 | Os12g0495800 | - | Detail |
| C2H12g13557 | 12:16,033,700-16,035,371 | - | C1H12g16592 | CX12g017492 | LOC_Os12g31340 | Os12g0496700 | - | Detail |
| C2H12g18907 | 12:16,038,616-16,043,379 | - | C1H12g06556 | CX12g018401 | LOC_Os12g31350 | Os12g0496900 | - | Detail |
| C2H12g06486 | 12:16,048,872-16,051,527 | + | C1H12g20250 | CX12g016965 | LOC_Os12g31370 | Os12g0497300 | RAD51A2, OsRad51A2, OsRAD51 | Detail |
| C2H12g02588 | 12:16,052,557-16,055,308 | - | C1H12g18512 | CX12g016672 | LOC_Os12g31380 | Os12g0497400 | - | Detail |
| C2H12g09359 | 12:16,065,395-16,066,270 | - | C1H12g16920 | CX12g017498 | LOC_Os12g31410 | Os12g0152800 | - | Detail |
| C2H12g24043 | 12:16,075,637-16,079,548 | + | C1H12g13420 | CX12g017630 | LOC_Os12g31440 | Os12g0498300 | - | Detail |
| C2H12g13092 | 12:16,080,206-16,082,270 | - | C1H12g13529 | CX12g016991 | LOC_Os12g31450 | Os12g0498400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |