| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g29942 | 12:4,589,116-4,591,397 | + | C2H12g21993 | CX12g015724 | LOC_Os12g10170 | Os12g0199500 | - | Detail |
| C1H12g23734 | 12:4,616,353-4,617,361 | - | C2H12g02513 | CX12g017268 | LOC_Os06g23340 | - | - | Detail |
| C1H12g26851 | 12:4,631,079-4,631,492 | - | C2H12g06069 | - | - | - | - | Detail |
| C1H12g08099 | 12:4,745,315-4,746,856 | + | C2H12g23156 | CX12g015438 | LOC_Os12g10140 | Os12g0202700 | - | Detail |
| C1H12g25986 | 12:4,747,716-4,748,767 | + | C2H12g10521 | CX12g015438 | LOC_Os12g10170 | Os12g0240900 | NOMT, OsNOMT, COMTL3, OsCOMTL3 | Detail |
| C1H12g24838 | 12:4,749,335-4,755,507 | - | C2H12g28534 | CX12g018391 | LOC_Os12g10180 | Os12g0202900 | - | Detail |
| C1H12g13815 | 12:4,756,959-4,759,016 | + | C2H12g14596 | CX12g015359 | LOC_Os12g10184 | Os12g0202850 | PGL12 | Detail |
| C1H12g15070 | 12:4,760,024-4,763,412 | + | C2H12g19800 | CX12g015359 | LOC_Os12g10190 | Os12g0203000 | - | Detail |
| C1H12g07643 | 12:4,764,423-4,766,881 | - | C2H12g26432 | CX12g015476 | LOC_Os12g10200 | Os12g0203100 | - | Detail |
| C1H12g30565 | 12:4,771,200-4,773,285 | + | C2H12g29948 | CX12g018695 | LOC_Os12g10220 | Os12g0203200 | - | Detail |
| C1H12g14694 | 12:4,800,328-4,800,810 | + | C2H12g27282 | CX12g017473 | LOC_Os12g10260 | Os12g0204000 | - | Detail |
| C1H12g14346 | 12:4,801,775-4,806,705 | + | C2H12g03169 | CX12g017473 | LOC_Os12g10270 | Os12g0632401 | - | Detail |
| C1H12g25521 | 12:4,811,369-4,814,332 | + | C2H12g06639 | CX12g015937 | LOC_Os12g10280 | Os12g0204100 | - | Detail |
| C1H12g12793 | 12:4,836,735-4,838,639 | - | C2H12g05093 | CX12g017749 | LOC_Os12g10330 | Os12g0204600 | - | Detail |
| C1H12g14579 | 12:4,842,518-4,844,473 | + | C2H12g02344 | CX12g015919 | LOC_Os12g10340 | Os12g0204800 | - | Detail |
| C1H12g02564 | 12:4,853,068-4,853,491 | - | C2H12g25946 | CX12g015129 | LOC_Os12g10360 | Os12g0204600 | - | Detail |
| C1H12g25059 | 12:4,855,166-4,855,744 | + | C2H12g14824 | - | LOC_Os12g10320 | Os12g0204500 | - | Detail |
| C1H12g01099 | 12:4,869,875-4,871,776 | - | C2H12g20127 | CX12g016073 | LOC_Os12g10390 | Os12g0204600 | - | Detail |
| C1H12g29266 | 12:4,880,354-4,886,434 | - | C2H12g17911 | CX12g018520 | LOC_Os12g10410 | Os12g0205500 | - | Detail |
| C1H12g30583 | 12:4,925,406-4,927,756 | - | C2H12g21157 | CX12g017375 | LOC_Os12g10520 | Os12g0206800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g13751 | 2:21,083,833-21,084,971 | - | C1H2g10875 | CX2g023061 | LOC_Os02g46460 | Os02g0580900 | - | Detail |
| C2H2g06434 | 2:21,091,798-21,100,705 | + | C1H2g25963 | CX2g020588 | LOC_Os02g37050 | Os02g0581000 | - | Detail |
| C2H2g26828 | 2:21,101,163-21,101,537 | + | C1H2g22542 | CX2g024191 | LOC_Os02g37060 | Os02g0581100 | - | Detail |
| C2H2g02302 | 2:21,122,317-21,127,070 | - | C1H2g09757 | CX2g023339 | LOC_Os02g37080 | Os02g0581300 | - | Detail |
| C2H2g09011 | 2:21,129,734-21,142,755 | + | C1H2g18622 | CX2g021297 | LOC_Os02g37090 | Os02g0581500 | - | Detail |
| C2H2g04808 | 2:21,146,555-21,146,761 | + | C1H2g23213 | CX2g024215 | LOC_Os02g37100 | Os02g0581800 | - | Detail |
| C2H2g03467 | 2:21,148,125-21,152,922 | - | C1H2g17777 | CX2g023651 | LOC_Os02g37120 | Os02g0582100 | - | Detail |
| C2H2g16849 | 2:21,157,652-21,161,612 | - | C1H2g12580 | CX2g024746 | LOC_Os02g37130 | Os02g0582200 | - | Detail |
| C2H2g08130 | 2:21,166,030-21,170,105 | - | C1H2g31329 | CX2g021347 | LOC_Os02g37140 | Os02g0582300 | - | Detail |
| C2H2g15608 | 2:21,172,941-21,173,448 | + | - | - | - | Os12g0518000 | - | Detail |
| C2H2g21420 | 2:21,176,289-21,179,203 | - | C1H2g02908 | CX2g021347 | LOC_Os02g37150 | Os02g0582400 | - | Detail |
| C2H2g23878 | 2:21,189,015-21,190,115 | - | C1H2g05984 | CX2g019875 | LOC_Os02g37160 | Os02g0582600 | - | Detail |
| C2H2g27221 | 2:21,201,544-21,202,817 | - | C1H2g11080 | - | - | Os02g0582900 | - | Detail |
| C2H2g18909 | 2:21,208,770-21,209,513 | - | C1H2g22529 | - | - | - | - | Detail |
| C2H2g20235 | 2:21,225,307-21,225,957 | - | C1H2g02482 | CX2g020020 | LOC_Os02g37250 | Os02g0583700 | - | Detail |
| C2H2g27619 | 2:21,232,032-21,237,140 | - | C1H2g03531 | CX2g020020 | LOC_Os02g37250 | Os02g0583700 | - | Detail |
| C2H2g05923 | 2:21,245,610-21,245,757 | - | C1H2g07776 | CX2g024910 | LOC_Os02g37260 | Os02g0584200 | - | Detail |
| C2H2g30188 | 2:21,265,512-21,265,953 | - | C1H2g13162 | CX2g019875 | LOC_Os02g37290 | Os02g0584700 | - | Detail |
| C2H2g03802 | 2:21,268,133-21,268,667 | - | C1H2g16847 | CX2g019875 | LOC_Os02g37300 | Os02g0584800 | OsHPP04 | Detail |
| C2H2g06291 | 2:21,283,806-21,284,538 | - | C1H2g22092 | CX2g020664 | LOC_Os02g37360 | Os02g0585700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |