| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g29942 | 12:4,589,116-4,591,397 | + | C2H12g21993 | CX12g015724 | LOC_Os12g10170 | Os12g0199500 | - | Detail |
| C1H12g23734 | 12:4,616,353-4,617,361 | - | C2H12g02513 | CX12g017268 | LOC_Os06g23340 | - | - | Detail |
| C1H12g26851 | 12:4,631,079-4,631,492 | - | C2H12g06069 | - | - | - | - | Detail |
| C1H12g08099 | 12:4,745,315-4,746,856 | + | C2H12g23156 | CX12g015438 | LOC_Os12g10140 | Os12g0202700 | - | Detail |
| C1H12g25986 | 12:4,747,716-4,748,767 | + | C2H12g10521 | CX12g015438 | LOC_Os12g10170 | Os12g0240900 | NOMT, OsNOMT, COMTL3, OsCOMTL3 | Detail |
| C1H12g24838 | 12:4,749,335-4,755,507 | - | C2H12g28534 | CX12g018391 | LOC_Os12g10180 | Os12g0202900 | - | Detail |
| C1H12g13815 | 12:4,756,959-4,759,016 | + | C2H12g14596 | CX12g015359 | LOC_Os12g10184 | Os12g0202850 | PGL12 | Detail |
| C1H12g15070 | 12:4,760,024-4,763,412 | + | C2H12g19800 | CX12g015359 | LOC_Os12g10190 | Os12g0203000 | - | Detail |
| C1H12g07643 | 12:4,764,423-4,766,881 | - | C2H12g26432 | CX12g015476 | LOC_Os12g10200 | Os12g0203100 | - | Detail |
| C1H12g30565 | 12:4,771,200-4,773,285 | + | C2H12g29948 | CX12g018695 | LOC_Os12g10220 | Os12g0203200 | - | Detail |
| C1H12g14694 | 12:4,800,328-4,800,810 | + | C2H12g27282 | CX12g017473 | LOC_Os12g10260 | Os12g0204000 | - | Detail |
| C1H12g14346 | 12:4,801,775-4,806,705 | + | C2H12g03169 | CX12g017473 | LOC_Os12g10270 | Os12g0632401 | - | Detail |
| C1H12g25521 | 12:4,811,369-4,814,332 | + | C2H12g06639 | CX12g015937 | LOC_Os12g10280 | Os12g0204100 | - | Detail |
| C1H12g12793 | 12:4,836,735-4,838,639 | - | C2H12g05093 | CX12g017749 | LOC_Os12g10330 | Os12g0204600 | - | Detail |
| C1H12g14579 | 12:4,842,518-4,844,473 | + | C2H12g02344 | CX12g015919 | LOC_Os12g10340 | Os12g0204800 | - | Detail |
| C1H12g02564 | 12:4,853,068-4,853,491 | - | C2H12g25946 | CX12g015129 | LOC_Os12g10360 | Os12g0204600 | - | Detail |
| C1H12g25059 | 12:4,855,166-4,855,744 | + | C2H12g14824 | - | LOC_Os12g10320 | Os12g0204500 | - | Detail |
| C1H12g01099 | 12:4,869,875-4,871,776 | - | C2H12g20127 | CX12g016073 | LOC_Os12g10390 | Os12g0204600 | - | Detail |
| C1H12g29266 | 12:4,880,354-4,886,434 | - | C2H12g17911 | CX12g018520 | LOC_Os12g10410 | Os12g0205500 | - | Detail |
| C1H12g30583 | 12:4,925,406-4,927,756 | - | C2H12g21157 | CX12g017375 | LOC_Os12g10520 | Os12g0206800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g23514 | 6:16,348,198-16,348,907 | - | C1H6g20688 | CX6g045905 | LOC_Os06g32600 | Os06g0509900 | - | Detail |
| C2H6g24462 | 6:16,431,579-16,432,280 | - | C1H6g10133 | CX6g045771 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g24549 | 6:16,457,623-16,458,351 | - | C1H6g30221 | CX6g041463 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g14991 | 6:16,483,688-16,484,416 | - | C1H6g30221 | CX6g045619 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g23945 | 6:16,509,772-16,510,500 | - | C1H6g30221 | CX6g045907 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g16104 | 6:16,538,260-16,538,988 | - | C1H6g15287 | CX6g045907 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g27735 | 6:16,544,055-16,544,504 | - | C1H11g18273 | - | - | - | - | Detail |
| C2H6g13109 | 6:16,552,095-16,552,876 | - | C1H6g28912 | CX6g045771 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g11325 | 6:16,555,595-16,556,742 | - | C1H6g14560 | CX6g045907 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g13030 | 6:16,568,032-16,568,670 | - | C1H6g25233 | CX6g045771 | LOC_Os06g32600 | Os06g0514800 | OsThi9 | Detail |
| C2H6g03154 | 6:16,602,458-16,603,353 | - | - | - | - | - | - | Detail |
| C2H6g27631 | 6:16,610,374-16,611,018 | - | C1H6g12241 | CX6g045360 | LOC_Os06g32600 | Os06g0517700 | OsTHION15 | Detail |
| C2H6g21791 | 6:16,626,079-16,626,484 | + | C1H6g12479 | CX6g045309 | - | Os06g0518300 | - | Detail |
| C2H6g04594 | 6:16,651,278-16,651,469 | + | C1H6g27321 | - | LOC_Os06g32720 | Os06g0519400 | - | Detail |
| C2H6g10214 | 6:16,651,569-16,654,254 | + | C1H6g27321 | CX6g042017 | LOC_Os06g32720 | Os06g0519400 | - | Detail |
| C2H6g10213 | 6:16,659,675-16,661,257 | + | C1H6g06224 | CX6g042017 | LOC_Os06g32730 | Os06g0520600 | - | Detail |
| C2H6g21865 | 6:16,673,501-16,674,029 | + | - | CX6g042771 | - | - | - | Detail |
| C2H6g19194 | 6:16,681,643-16,691,005 | + | C1H6g09724 | CX6g043106 | LOC_Os06g32780 | Os06g0519700 | - | Detail |
| C2H6g13541 | 6:16,693,260-16,695,415 | + | C1H6g01033 | - | - | - | - | Detail |
| C2H6g07675 | 6:16,702,638-16,707,866 | + | C1H6g06224 | CX6g043682 | LOC_Os06g32860 | Os06g0520600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |