| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g14699 | 12:4,298,988-4,301,829 | + | C2H12g20905 | CX12g016700 | LOC_Os12g09280 | Os12g0194700 | - | Detail |
| C1H12g12430 | 12:4,303,190-4,307,539 | - | C2H12g24786 | CX12g018743 | LOC_Os12g09250 | Os12g0194600 | - | Detail |
| C1H12g18185 | 12:4,329,039-4,329,708 | - | C2H12g06870 | - | - | Os12g0194266 | - | Detail |
| C1H12g08170 | 12:4,332,841-4,336,075 | - | C2H12g12025 | CX12g017165 | LOC_Os12g09190 | Os12g0193800 | - | Detail |
| C1H12g29621 | 12:4,336,328-4,348,865 | + | C2H12g14586 | CX12g015349 | LOC_Os12g09120 | Os12g0193200 | - | Detail |
| C1H12g21517 | 12:4,351,247-4,356,181 | + | C2H12g11874 | CX12g018612 | LOC_Os12g09089 | Os12g0193100 | - | Detail |
| C1H12g09926 | 12:4,364,336-4,365,463 | - | C2H12g23949 | CX12g018030 | LOC_Os12g09080 | Os12g0193000 | OsBRXL6, OsBRXL5 | Detail |
| C1H12g09634 | 12:4,425,833-4,429,783 | - | C2H12g27593 | CX12g016281 | LOC_Os12g09540 | Os12g0197100 | - | Detail |
| C1H12g03068 | 12:4,442,428-4,446,171 | + | C2H12g30512 | CX12g017856 | LOC_Os12g09570 | Os12g0197400 | - | Detail |
| C1H12g20394 | 12:4,446,904-4,452,237 | - | C2H12g12604 | CX12g017219 | LOC_Os12g09580 | Os12g0197500 | - | Detail |
| C1H12g19823 | 12:4,453,742-4,458,996 | - | C2H12g18171 | CX12g018792 | LOC_Os12g09590 | Os12g0197700 | OsSGS3b | Detail |
| C1H12g03605 | 12:4,472,758-4,481,696 | + | C2H12g18707 | CX12g016062 | LOC_Os12g09610 | Os12g0197900 | - | Detail |
| C1H12g29042 | 12:4,486,367-4,491,123 | - | C2H12g07996 | CX12g017038 | LOC_Os12g09640 | Os12g0198200 | - | Detail |
| C1H12g30959 | 12:4,511,630-4,512,232 | - | C2H12g09280 | CX12g018011 | LOC_Os12g09670 | Os12g0198500 | - | Detail |
| C1H12g00057 | 12:4,515,536-4,516,174 | - | C2H12g16031 | CX12g018011 | - | - | - | Detail |
| C1H12g21936 | 12:4,528,082-4,529,507 | - | C2H12g13338 | CX12g015241 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C1H12g18620 | 12:4,537,245-4,540,933 | + | C2H12g07984 | CX12g018163 | LOC_Os12g09710 | Os12g0198900 | - | Detail |
| C1H12g20422 | 12:4,543,013-4,545,970 | - | C2H12g13398 | CX12g016268 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C1H12g03660 | 12:4,552,283-4,562,356 | - | C2H12g09085 | CX12g016763 | LOC_Os12g10460 | Os12g0199100 | - | Detail |
| C1H12g18718 | 12:4,582,166-4,585,812 | + | C2H12g25382 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g09688 | 3:3,191,401-3,193,017 | - | C1H3g04648 | CX3g027461 | LOC_Os03g07260 | Os03g0168700 | - | Detail |
| C2H3g10633 | 3:3,194,261-3,194,461 | + | C1H3g06973 | CX3g029686 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| C2H3g26226 | 3:3,194,544-3,196,076 | + | C1H3g26589 | CX3g029686 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| C2H3g29541 | 3:3,197,024-3,200,400 | + | C1H3g22339 | CX3g029329 | LOC_Os03g07300 | Os03g0169100 | - | Detail |
| C2H3g19913 | 3:3,201,036-3,204,268 | - | C1H3g05071 | CX3g026826 | LOC_Os03g07310 | Os03g0169000 | - | Detail |
| C2H3g06080 | 3:3,209,799-3,218,697 | + | C1H3g30733 | CX3g027561 | LOC_Os03g07330 | Os03g0169300 | - | Detail |
| C2H3g03131 | 3:3,213,087-3,213,844 | - | C1H3g17744 | CX3g029153 | LOC_Os03g07340 | Os03g0169400 | - | Detail |
| C2H3g15611 | 3:3,224,007-3,226,727 | + | C1H3g30713 | CX3g029943 | LOC_Os03g07360 | Os03g0169600 | RDD4, OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12 | Detail |
| C2H3g04475 | 3:3,229,652-3,231,256 | - | C1H3g07573 | CX3g029455 | LOC_Os03g07370 | Os03g0169800 | WSL9 | Detail |
| C2H3g13284 | 3:3,232,972-3,235,178 | - | C1H3g28123 | CX3g026502 | LOC_Os03g07380 | Os03g0169900 | - | Detail |
| C2H3g19051 | 3:3,240,112-3,240,477 | - | C1H3g30140 | CX3g030142 | LOC_Os03g07400 | Os03g0170100 | - | Detail |
| C2H3g20350 | 3:3,243,795-3,247,329 | + | C1H3g19291 | CX3g026147 | LOC_Os03g07420 | Os03g0170300 | - | Detail |
| C2H3g22587 | 3:3,247,889-3,251,731 | - | C1H3g10171 | CX3g030033 | LOC_Os03g07430 | Os03g0170400 | OsRLCK102 | Detail |
| C2H3g17639 | 3:3,256,533-3,257,090 | - | C1H3g24740 | CX3g029150 | LOC_Os03g07440 | Os03g0170500 | - | Detail |
| C2H3g04350 | 3:3,263,703-3,266,489 | - | C1H3g30202 | CX3g026337 | LOC_Os03g07450 | Os03g0170600 | - | Detail |
| C2H3g02647 | 3:3,273,413-3,274,387 | + | C1H3g13830 | CX3g025444 | LOC_Os03g07470 | Os03g0170800 | - | Detail |
| C2H3g25317 | 3:3,276,597-3,282,402 | - | C1H3g13288 | CX3g025078 | LOC_Os03g07480 | Os03g0170900 | - | Detail |
| C2H3g26574 | 3:3,285,739-3,286,096 | + | - | - | - | Os11g0146950 | - | Detail |
| C2H3g08560 | 3:3,293,380-3,294,041 | - | C1H3g19778 | CX3g027135 | LOC_Os03g07510 | Os03g0171300 | PGL1, ILI6 | Detail |
| C2H3g08984 | 3:3,311,401-3,312,696 | + | C1H3g11183 | CX3g026056 | LOC_Os03g07530 | Os03g0171600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |