| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g14699 | 12:4,298,988-4,301,829 | + | C2H12g20905 | CX12g016700 | LOC_Os12g09280 | Os12g0194700 | - | Detail |
| C1H12g12430 | 12:4,303,190-4,307,539 | - | C2H12g24786 | CX12g018743 | LOC_Os12g09250 | Os12g0194600 | - | Detail |
| C1H12g18185 | 12:4,329,039-4,329,708 | - | C2H12g06870 | - | - | Os12g0194266 | - | Detail |
| C1H12g08170 | 12:4,332,841-4,336,075 | - | C2H12g12025 | CX12g017165 | LOC_Os12g09190 | Os12g0193800 | - | Detail |
| C1H12g29621 | 12:4,336,328-4,348,865 | + | C2H12g14586 | CX12g015349 | LOC_Os12g09120 | Os12g0193200 | - | Detail |
| C1H12g21517 | 12:4,351,247-4,356,181 | + | C2H12g11874 | CX12g018612 | LOC_Os12g09089 | Os12g0193100 | - | Detail |
| C1H12g09926 | 12:4,364,336-4,365,463 | - | C2H12g23949 | CX12g018030 | LOC_Os12g09080 | Os12g0193000 | OsBRXL6, OsBRXL5 | Detail |
| C1H12g09634 | 12:4,425,833-4,429,783 | - | C2H12g27593 | CX12g016281 | LOC_Os12g09540 | Os12g0197100 | - | Detail |
| C1H12g03068 | 12:4,442,428-4,446,171 | + | C2H12g30512 | CX12g017856 | LOC_Os12g09570 | Os12g0197400 | - | Detail |
| C1H12g20394 | 12:4,446,904-4,452,237 | - | C2H12g12604 | CX12g017219 | LOC_Os12g09580 | Os12g0197500 | - | Detail |
| C1H12g19823 | 12:4,453,742-4,458,996 | - | C2H12g18171 | CX12g018792 | LOC_Os12g09590 | Os12g0197700 | OsSGS3b | Detail |
| C1H12g03605 | 12:4,472,758-4,481,696 | + | C2H12g18707 | CX12g016062 | LOC_Os12g09610 | Os12g0197900 | - | Detail |
| C1H12g29042 | 12:4,486,367-4,491,123 | - | C2H12g07996 | CX12g017038 | LOC_Os12g09640 | Os12g0198200 | - | Detail |
| C1H12g30959 | 12:4,511,630-4,512,232 | - | C2H12g09280 | CX12g018011 | LOC_Os12g09670 | Os12g0198500 | - | Detail |
| C1H12g00057 | 12:4,515,536-4,516,174 | - | C2H12g16031 | CX12g018011 | - | - | - | Detail |
| C1H12g21936 | 12:4,528,082-4,529,507 | - | C2H12g13338 | CX12g015241 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C1H12g18620 | 12:4,537,245-4,540,933 | + | C2H12g07984 | CX12g018163 | LOC_Os12g09710 | Os12g0198900 | - | Detail |
| C1H12g20422 | 12:4,543,013-4,545,970 | - | C2H12g13398 | CX12g016268 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C1H12g03660 | 12:4,552,283-4,562,356 | - | C2H12g09085 | CX12g016763 | LOC_Os12g10460 | Os12g0199100 | - | Detail |
| C1H12g18718 | 12:4,582,166-4,585,812 | + | C2H12g25382 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09235 | 1:36,851,871-36,854,009 | - | C1H1g11623 | CX1g006536 | LOC_Os01g71700 | Os01g0945100 | - | Detail |
| C2H1g24519 | 1:36,858,714-36,861,165 | - | C1H1g21191 | CX1g006536 | LOC_Os01g71710 | Os01g0945200 | - | Detail |
| C2H1g29670 | 1:36,861,639-36,864,345 | - | C1H1g11423 | CX1g006536 | LOC_Os01g71720 | Os01g0945300 | - | Detail |
| C2H1g18303 | 1:36,864,934-36,867,473 | - | C1H1g04103 | CX1g006536 | LOC_Os01g71740 | Os01g0945600 | - | Detail |
| C2H1g10379 | 1:36,870,797-36,873,213 | - | C1H1g18820 | CX1g006536 | LOC_Os01g71760 | Os01g0945600 | - | Detail |
| C2H1g23990 | 1:36,873,831-36,878,409 | - | C1H1g09696 | CX1g003925 | LOC_Os01g71770 | Os01g0945800 | - | Detail |
| C2H1g17128 | 1:36,887,435-36,887,671 | - | C1H1g14230 | CX1g004537 | LOC_Os01g71790 | Os01g0946200 | - | Detail |
| C2H1g24810 | 1:36,888,008-36,889,146 | - | C1H1g16335 | CX1g000254 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| C2H1g02291 | 1:36,897,317-36,898,192 | - | C1H1g19149 | CX1g006063 | LOC_Os01g71800 | Os01g0946300 | - | Detail |
| C2H1g26163 | 1:36,900,112-36,903,361 | - | C1H1g28208 | CX1g000210 | - | Os01g0946850 | - | Detail |
| C2H1g07953 | 1:36,906,456-36,908,309 | - | - | - | - | - | - | Detail |
| C2H1g25094 | 1:36,919,669-36,921,795 | + | C1H1g01086 | CX1g004794 | LOC_Os01g71380 | Os01g0946500 | - | Detail |
| C2H1g07223 | 1:36,942,304-36,945,943 | - | C1H1g16091 | CX1g006940 | LOC_Os01g71930 | Os01g0947700 | Osg1 | Detail |
| C2H1g25982 | 1:36,981,790-36,988,960 | + | C1H1g28153 | CX1g005350 | LOC_Os01g71960 | Os01g0948100 | OsMus81, OsMus81beta, OsMus81β | Detail |
| C2H1g13478 | 1:37,002,136-37,003,954 | + | C1H1g11535 | CX1g002069 | LOC_Os01g71970 | Os01g0948200 | OsDLA | Detail |
| C2H1g24573 | 1:37,005,817-37,008,306 | + | C1H1g04988 | CX1g003090 | LOC_Os01g71980 | Os01g0948300 | - | Detail |
| C2H1g07613 | 1:37,008,276-37,011,927 | - | C1H1g12107 | CX1g004443 | LOC_Os01g71990 | Os01g0948400 | OsP5CR | Detail |
| C2H1g30437 | 1:37,012,513-37,016,447 | - | C1H1g04245 | CX1g001292 | LOC_Os01g72000 | Os01g0948500 | - | Detail |
| C2H1g07385 | 1:37,031,496-37,034,969 | - | C1H1g24544 | CX1g006785 | LOC_Os01g72020 | Os01g0948900 | OsBOP1, NH4 | Detail |
| C2H1g13462 | 1:37,072,871-37,077,521 | - | C1H1g23618 | CX1g002411 | LOC_Os01g72049 | Os01g0949060 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |