| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g10905 | 12:3,940,550-3,941,078 | + | - | - | - | Os12g0188566 | - | Detail |
| C1H12g30014 | 12:3,942,146-3,942,975 | + | C2H12g12412 | - | - | - | - | Detail |
| C1H12g05241 | 12:3,942,977-3,948,556 | + | C2H12g21980 | CX12g017298 | LOC_Os12g08740 | Os12g0188900 | - | Detail |
| C1H12g21808 | 12:3,946,973-3,947,506 | - | C2H12g01844 | CX12g017024 | - | Os12g0189100 | - | Detail |
| C1H12g16915 | 12:3,980,398-3,984,683 | + | C2H12g01367 | CX12g015280 | LOC_Os12g08760 | Os12g0189300 | - | Detail |
| C1H12g28974 | 12:3,986,862-3,987,762 | + | C2H12g03276 | CX12g018701 | LOC_Os12g08770 | Os12g0189400 | - | Detail |
| C1H12g04629 | 12:3,997,749-3,999,528 | - | C2H12g01795 | CX12g017300 | LOC_Os12g08780 | Os12g0189500 | OsYUC11, YUCCA11 | Detail |
| C1H12g25775 | 12:4,021,234-4,025,059 | + | C2H12g08940 | CX12g018088 | LOC_Os12g08800 | Os12g0189900 | - | Detail |
| C1H12g13538 | 12:4,025,561-4,029,769 | - | C2H12g15639 | CX12g017476 | LOC_Os12g08810 | Os12g0190000 | - | Detail |
| C1H12g06109 | 12:4,042,562-4,047,869 | + | C2H12g19857 | CX12g015669 | LOC_Os12g08820 | Os12g0190100 | - | Detail |
| C1H12g18735 | 12:4,047,979-4,049,541 | - | C2H12g19884 | CX12g016118 | LOC_Os12g08830 | Os12g0190200 | - | Detail |
| C1H12g28925 | 12:4,068,012-4,071,065 | - | C2H12g19779 | CX12g016245 | LOC_Os12g08850 | Os12g0190400 | - | Detail |
| C1H12g03417 | 12:4,105,045-4,107,644 | + | C2H12g16869 | CX12g016877 | LOC_Os12g08900 | Os12g0191300 | - | Detail |
| C1H12g08391 | 12:4,114,054-4,115,322 | - | C2H12g24855 | CX12g018491 | LOC_Os12g08920 | Os12g0191500 | - | Detail |
| C1H12g22853 | 12:4,158,792-4,163,129 | + | C2H12g23890 | CX12g017759 | LOC_Os12g09000 | Os12g0192500 | - | Detail |
| C1H12g04899 | 12:4,196,929-4,197,375 | + | C2H12g18630 | CX12g017759 | LOC_Os12g09000 | - | - | Detail |
| C1H12g19513 | 12:4,247,018-4,250,051 | - | C2H12g03943 | - | LOC_Os12g09060 | - | - | Detail |
| C1H12g16068 | 12:4,268,075-4,273,405 | + | C2H12g02493 | CX12g016460 | LOC_Os12g09320 | Os12g0181600 | OsAAP15 | Detail |
| C1H12g03375 | 12:4,278,914-4,282,601 | - | C2H12g13234 | CX12g015659 | LOC_Os12g09300 | Os12g0194900 | OsAAP4, OsAAP4a | Detail |
| C1H12g16559 | 12:4,290,781-4,299,040 | - | C2H12g01465 | CX12g017686 | LOC_Os12g09290 | Os12g0194800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g12888 | 5:1,454,303-1,458,741 | + | C1H5g06409 | CX5g038529 | - | Os05g0575400 | - | Detail |
| C2H5g25220 | 5:1,466,544-1,467,068 | - | C1H5g14331 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C2H5g24745 | 5:1,471,155-1,472,263 | - | C1H5g14331 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C2H5g23667 | 5:1,478,681-1,480,492 | - | C1H5g16799 | - | - | - | - | Detail |
| C2H5g10940 | 5:1,485,921-1,486,759 | + | C1H5g11198 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C2H5g13765 | 5:1,487,425-1,491,486 | - | C1H5g15292 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C2H5g03241 | 5:1,493,234-1,494,460 | + | C1H3g03993 | CX5g037263 | LOC_Os12g34990 | Os03g0288300 | - | Detail |
| C2H5g20349 | 5:1,498,611-1,502,634 | + | C1H5g09306 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C2H5g12419 | 5:1,520,537-1,521,252 | + | - | - | LOC_Os05g03960 | Os05g0130300 | - | Detail |
| C2H5g28718 | 5:1,521,612-1,529,770 | - | C1H5g31896 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C2H5g08536 | 5:1,536,595-1,537,004 | - | C1H5g15210 | - | - | Os05g0130500 | - | Detail |
| C2H5g08634 | 5:1,538,539-1,539,316 | + | - | - | LOC_Os05g04000 | Os05g0130600 | - | Detail |
| C2H5g17204 | 5:1,541,642-1,546,148 | - | C1H5g13927 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C2H5g23034 | 5:1,546,919-1,547,381 | + | C1H5g19982 | CX5g038388 | - | - | - | Detail |
| C2H5g10179 | 5:1,548,863-1,550,139 | + | C1H5g21167 | - | - | - | - | Detail |
| C2H5g12456 | 5:1,556,561-1,559,128 | - | C1H5g11003 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C2H5g08847 | 5:1,561,924-1,566,163 | - | C1H5g23202 | - | LOC_Os05g04070 | Os05g0131401 | - | Detail |
| C2H5g12807 | 5:1,568,750-1,571,496 | - | C1H5g00064 | CX5g041042 | LOC_Os05g04120 | Os05g0131500 | - | Detail |
| C2H5g15022 | 5:1,573,614-1,581,468 | - | C1H5g06759 | CX5g037262 | - | - | - | Detail |
| C2H5g11311 | 5:1,588,305-1,591,921 | + | C1H5g22859 | CX5g040539 | LOC_Os05g04150 | Os05g0131900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |