| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g06847 | 12:3,726,298-3,730,813 | - | C2H12g18895 | CX12g015985 | LOC_Os12g07950 | Os12g0179800 | OsSRT2, OsSRT702, OsSIR2b | Detail |
| C1H12g04084 | 12:3,738,794-3,743,701 | + | C2H12g10711 | CX12g017443 | LOC_Os12g07970 | Os12g0180100 | - | Detail |
| C1H12g26935 | 12:3,745,036-3,747,890 | - | C2H12g00531 | CX12g016892 | LOC_Os12g07990 | Os12g0180500 | - | Detail |
| C1H12g24025 | 12:3,756,673-3,757,837 | - | C2H12g26846 | CX12g017341 | LOC_Os12g08070 | Os12g0181300 | - | Detail |
| C1H12g30820 | 12:3,768,726-3,770,682 | + | C2H12g15436 | CX12g015947 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| C1H12g24779 | 12:3,781,363-3,783,340 | - | C2H12g22492 | CX12g016463 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| C1H12g17913 | 12:3,808,936-3,809,928 | - | C2H12g23384 | - | LOC_Os12g08160 | Os12g0182100 | - | Detail |
| C1H12g10186 | 12:3,810,509-3,815,422 | - | C2H12g19835 | CX12g017548 | LOC_Os12g08170 | Os12g0182200 | - | Detail |
| C1H12g04557 | 12:3,816,928-3,821,271 | - | C2H12g22418 | CX12g017738 | LOC_Os12g08180 | Os12g0182300 | SPL36 | Detail |
| C1H12g20756 | 12:3,831,715-3,832,201 | - | C2H12g16765 | CX12g016669 | LOC_Os12g08210 | Os12g0182600 | - | Detail |
| C1H12g24787 | 12:3,832,708-3,837,115 | + | C2H12g28848 | CX12g016799 | LOC_Os12g08220 | Os12g0182700 | HDAC10, OsHDAC10, HDA714 | Detail |
| C1H12g14015 | 12:3,839,138-3,840,942 | + | C2H12g00347 | CX12g015810 | LOC_Os12g08230 | Os12g0182800 | - | Detail |
| C1H12g08117 | 12:3,843,095-3,847,045 | + | C2H12g26410 | CX12g015556 | LOC_Os12g08260 | Os12g0183100 | - | Detail |
| C1H12g30783 | 12:3,847,171-3,849,960 | - | C2H12g20510 | CX12g017411 | LOC_Os12g08270 | Os12g0183200 | - | Detail |
| C1H12g15428 | 12:3,850,419-3,853,128 | - | C2H12g06987 | CX12g016591 | LOC_Os12g08280 | Os12g0183300 | - | Detail |
| C1H12g25360 | 12:3,890,767-3,895,087 | - | C2H12g09428 | CX12g017314 | LOC_Os12g08700 | Os12g0187800 | - | Detail |
| C1H12g07775 | 12:3,914,303-3,915,960 | + | C2H12g03496 | CX12g016900 | LOC_Os12g08710 | - | - | Detail |
| C1H12g31126 | 12:3,916,414-3,917,061 | + | C2H12g05779 | CX12g015558 | - | - | - | Detail |
| C1H12g06877 | 12:3,929,308-3,933,041 | + | C2H12g27339 | CX12g017927 | LOC_Os12g08720 | Os12g0188500 | - | Detail |
| C1H12g15050 | 12:3,940,161-3,941,149 | - | C2H12g14380 | CX12g015690 | LOC_Os12g08730 | Os12g0188700 | OsTrxm | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g11001 | 4:14,164,081-14,168,879 | - | C1H4g08997 | CX4g034310 | LOC_Os04g28210 | Os04g0349700 | - | Detail |
| C2H4g17175 | 4:14,180,175-14,182,661 | + | C1H4g05397 | CX4g034236 | LOC_Os04g28234 | Os04g0350000 | - | Detail |
| C2H4g23045 | 4:14,195,253-14,202,545 | + | C1H4g22441 | CX4g035357 | LOC_Os04g28260 | Os04g0350300 | - | Detail |
| C2H4g11650 | 4:14,222,224-14,225,155 | - | C1H4g22936 | CX4g032228 | LOC_Os04g28280 | Os04g0350700 | AN1, An-1, OsbHLH093, RAE1, An-1/RAE1, RAE1/An-1, Awn4-2 | Detail |
| C2H4g04479 | 4:14,248,339-14,250,711 | + | C1H4g25714 | CX4g035158 | LOC_Os04g28300 | Os04g0351333 | - | Detail |
| C2H4g21363 | 4:14,289,764-14,291,863 | - | - | CX4g032447 | - | Os04g0351933 | - | Detail |
| C2H4g20483 | 4:14,308,307-14,311,786 | - | C1H4g17106 | CX4g035796 | LOC_Os04g28420 | Os04g0352400 | OsFKBP65, OsFKBP62b | Detail |
| C2H4g20527 | 4:14,314,841-14,317,346 | - | C1H4g12183 | CX4g034006 | - | Os04g0514500 | - | Detail |
| C2H4g10375 | 4:14,317,655-14,317,945 | - | C1H12g08774 | CX4g034006 | LOC_Os12g33165 | Os12g0516350 | - | Detail |
| C2H4g19395 | 4:14,318,657-14,335,073 | - | C1H4g30599 | CX4g032773 | LOC_Os04g28460 | Os04g0353000 | - | Detail |
| C2H4g27416 | 4:14,346,233-14,353,053 | + | C1H4g12388 | CX4g035108 | LOC_Os04g28520 | Os04g0353600 | OsFAR5 | Detail |
| C2H4g00657 | 4:14,371,911-14,373,770 | + | C1H4g08909 | CX4g035108 | LOC_Os04g28620 | Os04g0353600 | OsFAR5 | Detail |
| C2H4g13961 | 4:14,391,075-14,395,383 | + | C1H4g20993 | CX4g035108 | LOC_Os04g28680 | Os04g0355500 | - | Detail |
| C2H4g02790 | 4:14,404,858-14,405,935 | + | C1H4g20993 | CX4g035108 | LOC_Os04g28520 | Os04g0353600 | OsFAR5 | Detail |
| C2H4g06544 | 4:14,456,359-14,463,117 | - | C1H4g04495 | CX4g031953 | LOC_Os04g28820 | Os04g0357300 | - | Detail |
| C2H4g26367 | 4:14,470,976-14,471,554 | + | - | - | - | - | - | Detail |
| C2H4g22686 | 4:14,483,131-14,484,729 | + | C1H4g03600 | CX4g035284 | LOC_Os04g28860 | - | - | Detail |
| C2H4g15541 | 4:14,485,331-14,485,621 | + | C1H4g03600 | CX4g035284 | LOC_Os04g28860 | - | - | Detail |
| C2H4g24652 | 4:14,487,401-14,490,996 | + | C1H4g03600 | - | LOC_Os04g28860 | - | - | Detail |
| C2H4g09999 | 4:14,491,622-14,493,859 | + | C1H4g03600 | CX4g031772 | LOC_Os04g28870 | Os04g0358000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |