| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g06847 | 12:3,726,298-3,730,813 | - | C2H12g18895 | CX12g015985 | LOC_Os12g07950 | Os12g0179800 | OsSRT2, OsSRT702, OsSIR2b | Detail |
| C1H12g04084 | 12:3,738,794-3,743,701 | + | C2H12g10711 | CX12g017443 | LOC_Os12g07970 | Os12g0180100 | - | Detail |
| C1H12g26935 | 12:3,745,036-3,747,890 | - | C2H12g00531 | CX12g016892 | LOC_Os12g07990 | Os12g0180500 | - | Detail |
| C1H12g24025 | 12:3,756,673-3,757,837 | - | C2H12g26846 | CX12g017341 | LOC_Os12g08070 | Os12g0181300 | - | Detail |
| C1H12g30820 | 12:3,768,726-3,770,682 | + | C2H12g15436 | CX12g015947 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| C1H12g24779 | 12:3,781,363-3,783,340 | - | C2H12g22492 | CX12g016463 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| C1H12g17913 | 12:3,808,936-3,809,928 | - | C2H12g23384 | - | LOC_Os12g08160 | Os12g0182100 | - | Detail |
| C1H12g10186 | 12:3,810,509-3,815,422 | - | C2H12g19835 | CX12g017548 | LOC_Os12g08170 | Os12g0182200 | - | Detail |
| C1H12g04557 | 12:3,816,928-3,821,271 | - | C2H12g22418 | CX12g017738 | LOC_Os12g08180 | Os12g0182300 | SPL36 | Detail |
| C1H12g20756 | 12:3,831,715-3,832,201 | - | C2H12g16765 | CX12g016669 | LOC_Os12g08210 | Os12g0182600 | - | Detail |
| C1H12g24787 | 12:3,832,708-3,837,115 | + | C2H12g28848 | CX12g016799 | LOC_Os12g08220 | Os12g0182700 | HDAC10, OsHDAC10, HDA714 | Detail |
| C1H12g14015 | 12:3,839,138-3,840,942 | + | C2H12g00347 | CX12g015810 | LOC_Os12g08230 | Os12g0182800 | - | Detail |
| C1H12g08117 | 12:3,843,095-3,847,045 | + | C2H12g26410 | CX12g015556 | LOC_Os12g08260 | Os12g0183100 | - | Detail |
| C1H12g30783 | 12:3,847,171-3,849,960 | - | C2H12g20510 | CX12g017411 | LOC_Os12g08270 | Os12g0183200 | - | Detail |
| C1H12g15428 | 12:3,850,419-3,853,128 | - | C2H12g06987 | CX12g016591 | LOC_Os12g08280 | Os12g0183300 | - | Detail |
| C1H12g25360 | 12:3,890,767-3,895,087 | - | C2H12g09428 | CX12g017314 | LOC_Os12g08700 | Os12g0187800 | - | Detail |
| C1H12g07775 | 12:3,914,303-3,915,960 | + | C2H12g03496 | CX12g016900 | LOC_Os12g08710 | - | - | Detail |
| C1H12g31126 | 12:3,916,414-3,917,061 | + | C2H12g05779 | CX12g015558 | - | - | - | Detail |
| C1H12g06877 | 12:3,929,308-3,933,041 | + | C2H12g27339 | CX12g017927 | LOC_Os12g08720 | Os12g0188500 | - | Detail |
| C1H12g15050 | 12:3,940,161-3,941,149 | - | C2H12g14380 | CX12g015690 | LOC_Os12g08730 | Os12g0188700 | OsTrxm | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g07629 | 5:22,064,353-22,067,318 | + | C1H5g10593 | CX5g039260 | LOC_Os05g45410 | Os05g0530400 | OsSPL7, SPL7, HSFA-4d | Detail |
| C2H5g03685 | 5:22,067,847-22,072,276 | - | C1H5g11637 | CX5g040944 | LOC_Os05g45420 | Os05g0530500 | - | Detail |
| C2H5g04972 | 5:22,073,757-22,074,254 | + | - | CX5g038767 | - | - | - | Detail |
| C2H5g21081 | 5:22,078,620-22,080,044 | - | C1H5g15948 | CX5g039408 | LOC_Os05g45430 | Os05g0530701 | - | Detail |
| C2H5g25354 | 5:22,092,044-22,092,487 | + | C1H5g13864 | CX5g038460 | LOC_Os05g45450 | Os05g0531100 | OsS40-1 | Detail |
| C2H5g07402 | 5:22,095,183-22,096,118 | + | C1H5g03559 | CX5g038119 | LOC_Os05g45460 | Os05g0531200 | - | Detail |
| C2H5g17651 | 5:22,102,533-22,103,427 | + | C1H5g22321 | CX5g037192 | LOC_Os05g45480 | Os05g0531400 | - | Detail |
| C2H5g11219 | 5:22,106,953-22,110,969 | + | C1H5g15758 | CX5g038581 | LOC_Os05g45490 | Os05g0531500 | - | Detail |
| C2H5g15734 | 5:22,111,662-22,112,486 | - | C1H5g28033 | CX5g037981 | LOC_Os05g45500 | Os05g0531600 | - | Detail |
| C2H5g12427 | 5:22,113,402-22,114,241 | + | C1H5g08016 | CX5g038393 | - | Os05g0531700 | - | Detail |
| C2H5g24044 | 5:22,120,833-22,122,254 | - | C1H5g04935 | CX5g038750 | LOC_Os05g45570 | Os05g0531800 | - | Detail |
| C2H5g13615 | 5:22,127,448-22,134,174 | + | C1H5g27355 | - | - | - | - | Detail |
| C2H5g02345 | 5:22,136,356-22,138,948 | - | C1H5g04935 | CX5g039224 | LOC_Os05g45570 | Os05g0532300 | - | Detail |
| C2H5g12338 | 5:22,142,104-22,144,335 | - | C1H5g05498 | CX5g040316 | LOC_Os05g45580 | Os05g0532500 | - | Detail |
| C2H5g06712 | 5:22,145,904-22,149,704 | - | C1H5g05803 | CX5g038442 | LOC_Os05g45590 | Os05g0532600 | OsHXK2 | Detail |
| C2H5g30367 | 5:22,150,996-22,151,253 | - | C1H5g22210 | CX5g039722 | LOC_Os05g45610 | Os05g0532800 | - | Detail |
| C2H5g14529 | 5:22,152,080-22,152,452 | + | C1H5g25723 | CX5g037022 | LOC_Os09g33986 | Os09g0515200 | - | Detail |
| C2H5g24963 | 5:22,153,495-22,156,675 | + | C1H5g21932 | CX5g038984 | LOC_Os05g45660 | Os05g0533100 | - | Detail |
| C2H5g26779 | 5:22,157,002-22,161,321 | - | C1H5g22241 | CX5g040305 | LOC_Os05g45670 | Os05g0533200 | - | Detail |
| C2H5g19069 | 5:22,166,219-22,167,019 | - | C1H5g26762 | CX5g037078 | LOC_Os05g45700 | Os05g0533450 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |