| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g20966 | 12:3,302,542-3,312,076 | + | C2H12g28594 | CX12g015598 | LOC_Os12g07300 | Os12g0170700 | - | Detail |
| C1H12g31083 | 12:3,315,836-3,318,161 | + | C2H12g30320 | CX12g018577 | LOC_Os12g07310 | Os12g0170800 | - | Detail |
| C1H12g14333 | 12:3,324,765-3,325,004 | + | C2H12g06137 | CX12g017511 | LOC_Os12g07340 | Os12g0170800 | - | Detail |
| C1H12g02404 | 12:3,328,220-3,328,624 | + | C2H12g23442 | CX12g017511 | LOC_Os12g07310 | Os12g0170800 | - | Detail |
| C1H12g08123 | 12:3,330,842-3,338,060 | + | C2H12g00108 | CX12g017364 | LOC_Os12g07350 | Os12g0171200 | - | Detail |
| C1H12g09894 | 12:3,358,893-3,359,354 | - | C2H8g28836 | CX12g017951 | - | - | - | Detail |
| C1H12g26803 | 12:3,388,120-3,388,792 | + | C2H12g24240 | CX12g016050 | LOC_Os12g07380 | Os12g0171600 | - | Detail |
| C1H12g22841 | 12:3,393,995-3,400,309 | - | C2H12g23734 | CX12g015255 | LOC_Os12g07450 | Os12g0172500 | - | Detail |
| C1H12g20718 | 12:3,445,465-3,446,739 | + | C2H12g19372 | CX12g016915 | LOC_Os12g07480 | Os12g0173300 | - | Detail |
| C1H12g19965 | 12:3,456,225-3,457,255 | + | C2H12g24516 | CX12g016817 | LOC_Os12g07490 | Os12g0173366 | - | Detail |
| C1H12g02920 | 12:3,459,345-3,461,996 | - | C2H12g30484 | CX12g016050 | LOC_Os12g07500 | Os12g0173400 | - | Detail |
| C1H12g26529 | 12:3,462,717-3,468,073 | + | C2H12g29759 | CX12g015915 | LOC_Os12g07530 | - | - | Detail |
| C1H12g02496 | 12:3,471,099-3,476,184 | + | C2H12g09225 | CX12g015330 | LOC_Os12g07540 | Os12g0174100 | - | Detail |
| C1H12g19045 | 12:3,492,580-3,493,308 | + | C2H12g07410 | CX12g017802 | - | Os12g0174300 | - | Detail |
| C1H12g09187 | 12:3,503,366-3,504,504 | + | C2H12g28346 | CX12g017402 | LOC_Os12g07580 | Os12g0174700 | - | Detail |
| C1H12g24191 | 12:3,506,423-3,511,311 | - | C2H12g00464 | CX12g015542 | LOC_Os12g07590 | Os12g0174800 | - | Detail |
| C1H12g21338 | 12:3,541,766-3,542,736 | + | C2H12g23569 | CX12g017649 | LOC_Os12g07640 | Os12g0175400 | Os2R_MYB94 | Detail |
| C1H12g22991 | 12:3,550,454-3,554,122 | - | C2H12g11252 | CX12g017726 | LOC_Os12g07650 | Os12g0175500 | - | Detail |
| C1H12g00864 | 12:3,554,864-3,555,190 | + | C2H12g28545 | CX12g015326 | LOC_Os08g06840 | - | - | Detail |
| C1H12g14489 | 12:3,556,678-3,556,994 | + | C2H12g13795 | - | - | Os12g0175600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g12729 | 1:33,028,778-33,029,629 | + | - | - | - | - | - | Detail |
| C2H1g08171 | 1:33,044,588-33,045,229 | + | C1H1g24698 | CX1g006898 | LOC_Os01g64620 | Os01g0866000 | - | Detail |
| C2H1g14468 | 1:33,062,097-33,065,472 | + | C1H1g21443 | CX1g006788 | LOC_Os01g64630 | Os01g0964133 | - | Detail |
| C2H1g26628 | 1:33,067,077-33,070,160 | + | C1H1g24361 | CX1g002061 | LOC_Os01g64650 | Os01g0866300 | - | Detail |
| C2H1g13692 | 1:33,071,806-33,074,738 | + | C1H1g19890 | CX1g002061 | LOC_Os01g64660 | Os01g0866400 | OscFBP1, MOC2 | Detail |
| C2H1g27654 | 1:33,074,943-33,076,275 | - | C1H1g06687 | CX1g003440 | LOC_Os01g64670 | Os01g0866500 | - | Detail |
| C2H1g02604 | 1:33,078,663-33,079,175 | - | C1H1g03251 | CX1g000969 | LOC_Os01g64680 | Os01g0866600 | - | Detail |
| C2H1g04946 | 1:33,079,993-33,081,615 | - | C1H1g20073 | CX1g003378 | LOC_Os01g64690 | Os01g0866700 | - | Detail |
| C2H1g24433 | 1:33,091,512-33,094,832 | + | C1H1g10677 | CX1g004424 | LOC_Os01g64700 | Os01g0866800 | - | Detail |
| C2H1g21915 | 1:33,098,085-33,106,160 | + | C1H1g07172 | CX1g005582 | - | Os01g0867100 | - | Detail |
| C2H1g21118 | 1:33,107,281-33,111,773 | + | C1H1g15015 | CX1g006694 | LOC_Os01g64720 | Os01g0867200 | - | Detail |
| C2H1g11092 | 1:33,112,440-33,115,002 | - | C1H1g09141 | CX1g000691 | LOC_Os01g64730 | Os01g0867300 | BZIP12, OsbZIP12, OsABF1 | Detail |
| C2H1g28759 | 1:33,119,935-33,129,326 | + | C1H1g05827 | CX1g004395 | LOC_Os01g64750 | Os01g0867600 | - | Detail |
| C2H1g15067 | 1:33,130,351-33,132,328 | + | C1H1g05655 | CX1g001594 | LOC_Os01g64760 | Os01g0867700 | - | Detail |
| C2H1g28339 | 1:33,134,001-33,137,688 | + | C1H1g18522 | CX1g006145 | LOC_Os01g64770 | Os01g0867800 | OsPTB1 | Detail |
| C2H1g30207 | 1:33,137,983-33,141,318 | - | C1H1g30751 | CX1g001130 | LOC_Os01g64780 | Os01g0867900 | - | Detail |
| C2H1g00754 | 1:33,143,439-33,145,825 | - | C1H1g06977 | CX1g003660 | LOC_Os01g64790 | Os01g0868000 | ERF99, OsEREBP2, EREBP2, OsERF#099, OsERF099, OsERF99, AP2/EREBP#080, AP2/EREBP80 | Detail |
| C2H1g16482 | 1:33,166,945-33,171,645 | - | C1H1g15696 | CX1g001548 | LOC_Os01g64810 | Os01g0868200 | - | Detail |
| C2H1g13803 | 1:33,175,093-33,185,351 | - | C1H1g06751 | CX1g000694 | LOC_Os01g64820 | Os01g0868300 | - | Detail |
| C2H1g17173 | 1:33,205,601-33,211,735 | - | C1H1g21599 | CX1g007144 | LOC_Os01g64870 | Os01g0869000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |