| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g07608 | 12:3,161,035-3,161,445 | - | C2H12g30034 | CX12g016336 | LOC_Os12g06990 | - | - | Detail |
| C1H12g17545 | 12:3,165,635-3,168,192 | + | C2H12g04399 | CX12g015790 | LOC_Os12g07010 | Os12g0167900 | RPL3A, OsRPL3A, ARP1, ARP3 | Detail |
| C1H12g31026 | 12:3,168,278-3,171,697 | + | C2H12g19833 | CX12g015615 | LOC_Os12g07020 | Os12g0168000 | - | Detail |
| C1H12g19083 | 12:3,173,778-3,176,434 | - | C2H12g28631 | CX12g016389 | LOC_Os12g07030 | Os12g0168100 | - | Detail |
| C1H12g04819 | 12:3,186,577-3,189,986 | - | C2H12g05405 | CX12g015166 | LOC_Os12g07050 | Os12g0168200 | - | Detail |
| C1H12g19579 | 12:3,191,876-3,198,278 | + | C2H12g18194 | CX12g018681 | LOC_Os12g07060 | Os12g0168400 | - | Detail |
| C1H12g19512 | 12:3,202,230-3,207,530 | + | C2H12g08447 | CX12g016053 | LOC_Os12g07110 | Os12g0168700 | - | Detail |
| C1H12g04767 | 12:3,214,569-3,216,326 | + | C2H12g15604 | CX12g015225 | LOC_Os12g07120 | Os12g0168800 | - | Detail |
| C1H12g27317 | 12:3,218,112-3,220,891 | - | C2H12g24626 | CX12g017113 | LOC_Os12g07140 | Os12g0168900 | - | Detail |
| C1H12g19831 | 12:3,221,768-3,227,939 | - | C2H12g20146 | CX12g015164 | LOC_Os12g07150 | Os12g0169000 | - | Detail |
| C1H12g22530 | 12:3,233,534-3,240,431 | - | C2H12g19916 | CX12g015604 | LOC_Os12g07160 | Os12g0169100 | - | Detail |
| C1H12g21208 | 12:3,243,279-3,248,305 | - | C2H12g14104 | CX12g017400 | LOC_Os12g07190 | Os12g0169400 | - | Detail |
| C1H12g22083 | 12:3,256,120-3,259,065 | + | C2H12g13538 | CX12g016575 | LOC_Os11g07020 | Os12g0169600 | - | Detail |
| C1H12g21678 | 12:3,262,569-3,265,900 | + | C2H12g25108 | CX12g018722 | LOC_Os12g07220 | Os12g0169700 | - | Detail |
| C1H12g29035 | 12:3,266,440-3,271,796 | - | C2H12g17009 | CX12g015571 | LOC_Os12g07230 | Os12g0169800 | OsCPK28 | Detail |
| C1H12g16331 | 12:3,276,793-3,280,065 | - | C2H12g13568 | CX12g018631 | LOC_Os12g07270 | Os12g0170300 | - | Detail |
| C1H12g07539 | 12:3,281,720-3,286,681 | - | C2H12g29604 | CX12g017955 | LOC_Os12g07260 | Os12g0170100 | - | Detail |
| C1H12g30403 | 12:3,288,430-3,291,737 | - | C2H12g18446 | CX12g017955 | LOC_Os12g07270 | Os12g0170300 | - | Detail |
| C1H12g21459 | 12:3,295,649-3,297,064 | + | C2H12g08601 | - | LOC_Os12g07280 | Os12g0170400 | ART1, STAR3 | Detail |
| C1H12g00160 | 12:3,297,722-3,301,736 | + | C2H12g22537 | CX12g017245 | LOC_Os12g07290 | Os12g0170600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g08610 | 1:13,810,471-13,815,866 | + | C1H1g21722 | CX1g007040 | LOC_Os01g27160 | Os01g0369200 | OsCUL1-3 | Detail |
| C2H1g00961 | 1:13,816,389-13,821,011 | - | C1H1g09984 | CX1g002985 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| C2H1g23105 | 1:13,824,371-13,825,390 | + | C1H1g21027 | CX1g004644 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| C2H1g15692 | 1:13,825,474-13,826,315 | + | C1H1g15878 | - | - | - | - | Detail |
| C2H1g16294 | 1:13,829,095-13,829,599 | + | C1H1g28118 | CX1g005028 | - | - | - | Detail |
| C2H1g16460 | 1:13,834,853-13,836,145 | - | C1H1g15388 | CX1g002058 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| C2H1g30124 | 1:13,848,128-13,855,233 | - | C1H1g06071 | CX1g000151 | LOC_Os01g27230 | Os01g0369900 | - | Detail |
| C2H1g01507 | 1:13,883,190-13,884,613 | - | C1H1g03681 | CX1g005680 | LOC_Os01g27240 | Os01g0370000 | - | Detail |
| C2H1g22665 | 1:13,889,659-13,890,761 | - | C1H1g30782 | CX1g001786 | LOC_Os01g27260 | Os01g0370200 | - | Detail |
| C2H1g21352 | 1:13,895,439-13,896,255 | + | C1H1g22563 | CX1g004528 | LOC_Os01g27300 | Os01g0370600 | - | Detail |
| C2H1g26657 | 1:13,918,791-13,920,178 | - | C1H1g11191 | CX1g000438 | LOC_Os01g27340 | Os01g0371200 | - | Detail |
| C2H1g23519 | 1:13,944,433-13,946,386 | - | C1H1g11191 | CX1g000438 | LOC_Os01g27360 | Os01g0371200 | - | Detail |
| C2H1g16372 | 1:13,954,176-13,956,281 | + | C1H1g01633 | CX1g000761 | LOC_Os01g27380 | Os01g0371400 | - | Detail |
| C2H1g14709 | 1:13,956,947-13,959,760 | + | C1H1g01995 | CX1g000761 | LOC_Os01g27390 | Os01g0371500 | - | Detail |
| C2H1g17472 | 1:13,973,405-13,974,157 | + | C1H1g01504 | CX1g005217 | LOC_Os01g27470 | Os01g0918300 | - | Detail |
| C2H1g25553 | 1:13,974,176-13,974,463 | + | C1H1g01504 | CX1g005217 | LOC_Os01g27470 | Os01g0918300 | - | Detail |
| C2H1g29817 | 1:13,978,729-13,979,604 | + | C1H1g12705 | CX1g000438 | LOC_Os01g27480 | Os01g0372400 | - | Detail |
| C2H1g22981 | 1:13,987,387-13,991,283 | - | C1H1g03999 | CX1g002992 | LOC_Os01g27520 | Os01g0372700 | - | Detail |
| C2H1g25759 | 1:13,997,755-13,999,810 | - | C1H1g23536 | - | LOC_Os01g27570 | Os01g0373200 | - | Detail |
| C2H1g27806 | 1:14,003,189-14,003,766 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |