| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g07730 | 12:2,959,135-2,966,255 | + | C2H12g07375 | CX12g017450 | LOC_Os12g06670 | Os12g0163800 | - | Detail |
| C1H12g11936 | 12:2,968,068-2,971,569 | + | C2H12g06388 | CX12g015091 | LOC_Os12g06660 | Os12g0163700 | - | Detail |
| C1H12g27241 | 12:2,977,275-2,981,347 | + | C2H12g15602 | - | - | - | - | Detail |
| C1H12g10951 | 12:2,982,906-2,987,021 | + | C2H12g05777 | CX12g017371 | LOC_Os12g06630 | Os12g0163400 | - | Detail |
| C1H12g15474 | 12:2,987,990-2,991,270 | + | C2H12g23191 | CX12g018416 | LOC_Os12g06620 | Os12g0163300 | - | Detail |
| C1H12g05227 | 12:2,991,941-2,998,202 | - | C2H12g28717 | CX12g017876 | LOC_Os12g06610 | Os12g0163200 | - | Detail |
| C1H12g11426 | 12:3,000,695-3,004,268 | + | C2H12g09245 | CX12g017374 | LOC_Os12g06570 | Os12g0163000 | OsCNGC8 | Detail |
| C1H12g23930 | 12:3,006,244-3,011,188 | + | C2H12g09409 | CX12g018286 | LOC_Os12g06560 | Os12g0162900 | - | Detail |
| C1H12g22069 | 12:3,033,283-3,034,122 | - | C2H12g06347 | - | - | - | - | Detail |
| C1H12g04385 | 12:3,036,123-3,042,417 | - | C2H12g05337 | CX12g018760 | LOC_Os12g06800 | Os12g0164800 | - | Detail |
| C1H12g12257 | 12:3,044,874-3,056,458 | - | C2H12g11169 | - | - | - | - | Detail |
| C1H12g15193 | 12:3,059,983-3,061,522 | - | C2H12g04241 | CX12g016446 | LOC_Os12g06820 | Os12g0165200 | - | Detail |
| C1H12g06624 | 12:3,062,586-3,063,551 | + | C2H12g06250 | CX12g017703 | LOC_Os12g06830 | Os12g0170800 | - | Detail |
| C1H12g12668 | 12:3,067,708-3,070,734 | - | C2H12g28260 | CX12g016648 | LOC_Os12g06850 | Os12g0165700 | - | Detail |
| C1H12g14530 | 12:3,079,904-3,086,083 | + | C2H12g19247 | CX12g015568 | LOC_Os12g06870 | Os12g0165900 | - | Detail |
| C1H12g31175 | 12:3,088,257-3,094,568 | + | C2H12g19586 | CX12g018721 | LOC_Os12g06890 | Os12g0166000 | - | Detail |
| C1H12g26980 | 12:3,098,363-3,099,945 | - | C2H12g06847 | CX12g016377 | LOC_Os12g06900 | Os12g0166300 | - | Detail |
| C1H12g11054 | 12:3,101,711-3,110,098 | + | C2H12g19939 | CX12g018245 | LOC_Os12g06910 | Os12g0166500 | - | Detail |
| C1H12g20663 | 12:3,117,710-3,122,598 | + | C2H12g08053 | CX12g017000 | LOC_Os12g06920 | Os12g0166600 | - | Detail |
| C1H12g08458 | 12:3,146,660-3,157,265 | - | C2H12g00878 | CX12g015798 | LOC_Os12g06980 | Os12g0167700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g02593 | 4:29,326,920-29,329,525 | - | C1H4g30864 | CX4g036239 | LOC_Os04g56970 | Os04g0665400 | - | Detail |
| C2H4g28957 | 4:29,330,937-29,334,919 | + | C1H4g09343 | CX4g033681 | LOC_Os04g56980 | Os04g0665500 | - | Detail |
| C2H4g00001 | 4:29,335,587-29,337,864 | - | C1H4g05828 | CX4g031794 | LOC_Os04g56990 | Os04g0665600 | RLI1b | Detail |
| C2H4g12242 | 4:29,346,217-29,350,384 | + | C1H4g09596 | CX4g036304 | LOC_Os04g57010 | Os04g0665700 | - | Detail |
| C2H4g11326 | 4:29,350,962-29,353,825 | + | C1H4g30725 | CX4g034037 | LOC_Os04g57020 | Os04g0665800 | - | Detail |
| C2H4g21652 | 4:29,354,782-29,355,237 | - | - | CX4g034903 | LOC_Os04g57030 | Os04g0665900 | - | Detail |
| C2H4g19860 | 4:29,362,450-29,363,014 | + | C1H4g22043 | CX4g033683 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g10951 | 4:29,379,023-29,380,236 | - | C1H4g10999 | CX4g036202 | LOC_Os04g35610 | Os04g0118700 | - | Detail |
| C2H4g15180 | 4:29,387,199-29,389,061 | + | C1H4g22979 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g00735 | 4:29,390,985-29,393,367 | + | C1H4g03241 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g03747 | 4:29,396,383-29,398,015 | + | C1H4g01851 | CX4g031479 | LOC_Os04g57080 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g03474 | 4:29,400,385-29,401,819 | + | C1H4g29852 | CX4g031652 | LOC_Os04g57090 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g06767 | 4:29,415,602-29,416,401 | - | C1H4g05569 | CX4g036468 | LOC_Os04g57130 | Os04g0666800 | - | Detail |
| C2H4g00020 | 4:29,417,068-29,427,230 | - | C1H4g31368 | CX4g031983 | LOC_Os04g57140 | Os04g0666900 | - | Detail |
| C2H4g16878 | 4:29,428,962-29,429,486 | + | - | CX4g036271 | LOC_Os04g43720 | Os04g0517600 | - | Detail |
| C2H4g20070 | 4:29,431,894-29,432,340 | - | - | - | - | - | - | Detail |
| C2H4g09686 | 4:29,431,991-29,432,428 | + | - | - | - | - | - | Detail |
| C2H4g30626 | 4:29,434,012-29,437,838 | - | C1H4g07804 | CX4g034693 | LOC_Os04g57150 | Os04g0667000 | - | Detail |
| C2H4g27314 | 4:29,439,637-29,441,953 | + | C1H4g29276 | CX4g034777 | LOC_Os04g57160 | Os04g0667200 | - | Detail |
| C2H4g03010 | 4:29,447,466-29,448,038 | - | C1H4g22147 | CX4g031690 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |