| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g26534 | 12:2,639,509-2,640,747 | - | C2H12g29667 | CX12g018202 | LOC_Os12g06080 | Os12g0157000 | - | Detail |
| C1H12g29304 | 12:2,652,631-2,657,063 | - | C2H12g07567 | CX12g015097 | LOC_Os12g06100 | Os12g0157200 | - | Detail |
| C1H12g00096 | 12:2,674,575-2,674,943 | + | C2H12g21615 | CX12g017990 | LOC_Os12g06130 | Os12g0157700 | - | Detail |
| C1H12g07813 | 12:2,736,137-2,742,137 | + | C2H12g13101 | CX12g016240 | LOC_Os12g06180 | Os12g0158600 | - | Detail |
| C1H12g04349 | 12:2,748,234-2,752,870 | - | C2H12g24008 | CX12g018078 | LOC_Os12g06200 | Os12g0158800 | OsE2F2 | Detail |
| C1H12g29219 | 12:2,778,057-2,784,845 | - | C2H12g08720 | CX12g016442 | LOC_Os12g06270 | Os12g0159700 | - | Detail |
| C1H12g10472 | 12:2,787,671-2,788,084 | + | C2H12g05778 | CX12g017068 | LOC_Os12g06280 | Os12g0160100 | - | Detail |
| C1H12g06122 | 12:2,796,407-2,798,461 | - | C2H12g08070 | CX12g017561 | LOC_Os12g06290 | Os12g0160200 | - | Detail |
| C1H12g12753 | 12:2,801,919-2,804,732 | + | C2H12g11683 | - | LOC_Os12g06300 | Os12g0160300 | - | Detail |
| C1H12g24945 | 12:2,813,009-2,817,662 | + | C2H12g29516 | CX12g015109 | LOC_Os12g06330 | Os12g0160400 | - | Detail |
| C1H12g19020 | 12:2,818,280-2,822,980 | - | C2H12g11453 | CX12g017963 | LOC_Os12g06340 | Os12g0160500 | - | Detail |
| C1H12g30816 | 12:2,819,351-2,821,719 | + | C2H12g07679 | - | - | Os12g0160650 | - | Detail |
| C1H12g22557 | 12:2,835,319-2,839,566 | + | C2H12g13093 | CX12g017471 | LOC_Os12g06380 | Os12g0160900 | - | Detail |
| C1H12g04535 | 12:2,864,519-2,866,878 | - | C2H12g14426 | CX12g018410 | LOC_Os12g06440 | Os12g0161500 | - | Detail |
| C1H12g19684 | 12:2,880,662-2,886,304 | - | C2H12g21634 | CX12g018410 | LOC_Os12g06464 | Os12g0161700 | - | Detail |
| C1H12g07840 | 12:2,903,729-2,908,007 | - | C2H12g07878 | CX12g018410 | LOC_Os12g06480 | Os12g0161900 | - | Detail |
| C1H12g14206 | 12:2,914,481-2,917,541 | - | C2H12g10139 | CX12g018308 | LOC_Os12g06490 | Os12g0162100 | OsWNK9 | Detail |
| C1H12g18731 | 12:2,929,429-2,934,566 | - | C2H12g22630 | CX12g018571 | LOC_Os12g06510 | Os12g0162400 | OsCBL6 | Detail |
| C1H12g02018 | 12:2,934,171-2,934,819 | + | - | - | - | - | - | Detail |
| C1H12g07616 | 12:2,938,096-2,941,817 | + | C2H12g02926 | CX12g015432 | LOC_Os12g06520 | Os12g0162500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g18815 | 2:22,964,531-22,973,156 | - | C1H2g02429 | CX2g019377 | LOC_Os02g40460 | Os02g0617700 | - | Detail |
| C2H2g29974 | 2:22,984,697-22,984,957 | - | - | - | - | - | - | Detail |
| C2H2g26929 | 2:22,988,593-22,990,462 | + | C1H2g22582 | - | LOC_Os02g40490 | - | - | Detail |
| C2H2g04756 | 2:22,994,675-22,996,352 | + | C1H2g02238 | CX2g024840 | LOC_Os02g40500 | Os02g0618100 | OsGRX9, OsGrx_C2.1 | Detail |
| C2H2g05107 | 2:22,997,619-23,000,421 | + | C1H2g04978 | CX2g024264 | LOC_Os02g40510 | Os02g0618200 | OsPRR1, OsTOC1, OsPRR1/OsTOC1 | Detail |
| C2H2g25708 | 2:23,002,033-23,003,523 | - | C1H2g16546 | - | LOC_Os02g40514 | Os02g0618250 | - | Detail |
| C2H2g01262 | 2:23,008,365-23,009,939 | - | C1H2g01139 | CX2g019264 | LOC_Os02g40530 | Os02g0618400 | OsMPS | Detail |
| C2H2g01838 | 2:23,025,294-23,026,795 | + | C1H2g19268 | CX2g024894 | LOC_Os02g40550 | Os02g0618700 | - | Detail |
| C2H2g30582 | 2:23,043,425-23,044,159 | - | - | - | LOC_Os02g40600 | - | - | Detail |
| C2H2g02169 | 2:23,070,406-23,075,582 | - | C1H2g16057 | CX2g023988 | LOC_Os02g40664 | Os02g0619600 | - | Detail |
| C2H2g26987 | 2:23,075,966-23,077,800 | + | C1H2g04094 | - | - | - | - | Detail |
| C2H2g19869 | 2:23,080,364-23,080,630 | - | - | - | - | - | - | Detail |
| C2H2g18142 | 2:23,088,767-23,092,303 | + | C1H2g31349 | CX2g019895 | LOC_Os02g40680 | Os02g0620100 | - | Detail |
| C2H2g10513 | 2:23,093,099-23,093,482 | + | C1H2g31349 | CX2g020219 | LOC_Os02g40690 | Os02g0620200 | - | Detail |
| C2H2g22522 | 2:23,099,083-23,099,503 | + | C1H2g24265 | CX2g023588 | LOC_Os02g40700 | Os02g0620400 | - | Detail |
| C2H2g07540 | 2:23,105,722-23,107,218 | + | C1H2g23096 | CX2g024155 | LOC_Os02g40710 | Os02g0620500 | OsAMT1;3 | Detail |
| C2H2g29061 | 2:23,111,389-23,115,393 | + | C1H2g17359 | CX2g024932 | LOC_Os02g40730 | Os02g0620600 | AMT1;2, OsAMT1;2, AMT1-2, Osamt1-3, "OsAMT1, 3", OsAMT1;3, OsAMT1.3, OsAMT1.2 | Detail |
| C2H2g23641 | 2:23,118,462-23,120,057 | - | C1H2g17305 | CX2g024918 | LOC_Os02g40750 | Os02g0769900 | - | Detail |
| C2H2g07915 | 2:23,128,520-23,133,173 | - | - | - | - | - | - | Detail |
| C2H2g25432 | 2:23,136,851-23,144,033 | + | C1H2g09682 | CX2g022252 | LOC_Os02g40770 | Os02g0621100 | SDG712 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |