| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g23110 | 12:2,163,126-2,165,646 | + | C2H3g00532 | - | - | - | - | Detail |
| C1H12g00004 | 12:2,167,334-2,170,314 | + | C2H12g07258 | CX12g017200 | LOC_Os12g05230 | Os12g0147500 | - | Detail |
| C1H12g27513 | 12:2,197,989-2,198,425 | + | C2H12g29923 | CX12g018143 | LOC_Os12g05260 | Os12g0147800 | OsPSK5, PSK5 | Detail |
| C1H12g14632 | 12:2,223,473-2,235,536 | - | C2H12g11473 | CX12g015934 | LOC_Os12g05310 | Os12g0148400 | - | Detail |
| C1H12g24063 | 12:2,242,369-2,247,718 | + | C2H12g12632 | CX12g016883 | LOC_Os12g05320 | Os12g0148600 | - | Detail |
| C1H12g15447 | 12:2,248,546-2,250,167 | - | C2H12g01567 | CX12g015209 | LOC_Os12g05330 | Os12g0148700 | - | Detail |
| C1H12g30747 | 12:2,263,488-2,266,200 | + | C2H12g09179 | CX12g016510 | LOC_Os12g05360 | Os12g0149000 | - | Detail |
| C1H12g27311 | 12:2,272,260-2,272,586 | - | C2H12g13534 | CX12g017610 | LOC_Os12g05370 | Os11g0150450 | - | Detail |
| C1H12g27756 | 12:2,284,063-2,288,323 | + | C2H12g10982 | CX12g016333 | LOC_Os12g05394 | Os12g0149700 | OsAGC23 | Detail |
| C1H12g08261 | 12:2,292,337-2,293,596 | + | C2H12g22641 | CX12g018469 | LOC_Os12g05410 | Os12g0149800 | - | Detail |
| C1H12g16772 | 12:2,293,810-2,297,472 | - | C2H12g14618 | CX12g015371 | LOC_Os12g05420 | Os12g0149900 | - | Detail |
| C1H12g16085 | 12:2,340,148-2,341,871 | - | C2H12g10067 | CX12g018115 | LOC_Os12g05510 | Os12g0150700 | - | Detail |
| C1H12g07376 | 12:2,349,637-2,352,374 | + | C2H12g10170 | CX12g016582 | LOC_Os12g05540 | Os12g0151000 | - | Detail |
| C1H12g16450 | 12:2,365,383-2,372,118 | + | C2H12g01016 | - | - | Os12g0151900 | - | Detail |
| C1H12g08468 | 12:2,366,545-2,367,503 | - | C2H12g20148 | CX12g017701 | LOC_Os12g05590 | Os12g0152000 | Oscen1, FDR1, RCN3, Oscen1/ FDR1 | Detail |
| C1H12g07729 | 12:2,373,440-2,375,234 | + | C2H12g12457 | CX12g018389 | LOC_Os12g05600 | Os12g0152100 | - | Detail |
| C1H12g30150 | 12:2,390,811-2,391,824 | + | C2H12g13362 | CX12g018389 | LOC_Os12g05630 | Os12g0152500 | - | Detail |
| C1H12g00663 | 12:2,395,162-2,397,324 | - | C2H12g01708 | CX12g017206 | LOC_Os12g05640 | Os12g0152600 | - | Detail |
| C1H12g14242 | 12:2,398,304-2,402,880 | - | C2H12g04327 | CX12g016024 | LOC_Os12g05650 | Os12g0152700 | - | Detail |
| C1H12g29017 | 12:2,409,864-2,414,637 | + | C2H12g22774 | CX12g017584 | LOC_Os12g05660 | Os12g0152800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g11402 | 3:29,794,380-29,799,968 | + | C1H3g13683 | CX3g031049 | LOC_Os03g57100 | Os03g0784400 | - | Detail |
| C2H3g07899 | 3:29,800,210-29,805,087 | - | C1H3g10935 | CX3g030487 | LOC_Os03g57110 | Os03g0784500 | - | Detail |
| C2H3g13132 | 3:29,807,102-29,809,604 | - | C1H3g05217 | CX3g029787 | LOC_Os03g57120 | Os03g0784700 | - | Detail |
| C2H3g20434 | 3:29,811,787-29,817,313 | - | C1H3g28643 | CX3g028010 | LOC_Os03g57130 | Os03g0784800 | - | Detail |
| C2H3g13858 | 3:29,821,310-29,823,272 | - | C1H3g24334 | CX3g030089 | LOC_Os03g57140 | Os03g0784900 | - | Detail |
| C2H3g24386 | 3:29,827,241-29,835,794 | - | C1H3g27734 | CX3g029863 | LOC_Os03g57160 | Os03g0785300 | - | Detail |
| C2H3g16096 | 3:29,836,112-29,838,337 | + | C1H3g31468 | CX3g025222 | LOC_Os03g57170 | Os03g0785500 | - | Detail |
| C2H3g04828 | 3:29,860,532-29,863,301 | + | C1H3g09812 | CX3g026845 | LOC_Os03g57210 | Os03g0786000 | - | Detail |
| C2H3g03414 | 3:29,864,625-29,868,137 | + | C1H3g18801 | CX3g026915 | LOC_Os03g57220 | Os03g0786100 | - | Detail |
| C2H3g29782 | 3:29,889,346-29,893,615 | - | C1H3g21165 | CX3g028697 | LOC_Os03g57260 | Os03g0786500 | - | Detail |
| C2H3g21493 | 3:29,897,856-29,903,093 | + | C1H3g31737 | CX3g030417 | LOC_Os03g57280 | Os03g0786700 | - | Detail |
| C2H3g10038 | 3:29,904,015-29,911,113 | + | C1H3g24529 | CX3g028623 | LOC_Os03g57290 | Os03g0786800 | OsCUL4 | Detail |
| C2H3g05716 | 3:29,911,514-29,922,874 | + | C1H3g09796 | CX3g029095 | LOC_Os03g57300 | Os03g0786900 | - | Detail |
| C2H3g27192 | 3:29,925,945-29,926,940 | + | C1H3g02488 | CX3g028386 | LOC_Os03g57310 | Os03g0787000 | OsSYP121 | Detail |
| C2H3g21961 | 3:29,927,425-29,929,638 | - | C1H3g16088 | CX3g030867 | LOC_Os03g57320 | Os03g0787100 | - | Detail |
| C2H3g21062 | 3:29,930,700-29,934,610 | - | C1H3g27493 | CX3g026667 | LOC_Os03g57330 | Os03g0787200 | - | Detail |
| C2H3g10560 | 3:29,943,017-29,943,547 | + | - | - | - | - | - | Detail |
| C2H3g19623 | 3:29,944,722-29,947,334 | + | C1H3g15177 | CX3g029651 | LOC_Os03g57340 | Os03g0787300 | OsDjA5 | Detail |
| C2H3g03483 | 3:29,951,553-29,952,355 | - | C1H3g04736 | CX3g028358 | LOC_Os03g57360 | Os03g0813700 | - | Detail |
| C2H3g16218 | 3:29,960,956-29,961,579 | + | C1H3g02833 | CX3g028483 | LOC_Os03g57410 | Os03g0788100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |