| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g23110 | 12:2,163,126-2,165,646 | + | C2H3g00532 | - | - | - | - | Detail |
| C1H12g00004 | 12:2,167,334-2,170,314 | + | C2H12g07258 | CX12g017200 | LOC_Os12g05230 | Os12g0147500 | - | Detail |
| C1H12g27513 | 12:2,197,989-2,198,425 | + | C2H12g29923 | CX12g018143 | LOC_Os12g05260 | Os12g0147800 | OsPSK5, PSK5 | Detail |
| C1H12g14632 | 12:2,223,473-2,235,536 | - | C2H12g11473 | CX12g015934 | LOC_Os12g05310 | Os12g0148400 | - | Detail |
| C1H12g24063 | 12:2,242,369-2,247,718 | + | C2H12g12632 | CX12g016883 | LOC_Os12g05320 | Os12g0148600 | - | Detail |
| C1H12g15447 | 12:2,248,546-2,250,167 | - | C2H12g01567 | CX12g015209 | LOC_Os12g05330 | Os12g0148700 | - | Detail |
| C1H12g30747 | 12:2,263,488-2,266,200 | + | C2H12g09179 | CX12g016510 | LOC_Os12g05360 | Os12g0149000 | - | Detail |
| C1H12g27311 | 12:2,272,260-2,272,586 | - | C2H12g13534 | CX12g017610 | LOC_Os12g05370 | Os11g0150450 | - | Detail |
| C1H12g27756 | 12:2,284,063-2,288,323 | + | C2H12g10982 | CX12g016333 | LOC_Os12g05394 | Os12g0149700 | OsAGC23 | Detail |
| C1H12g08261 | 12:2,292,337-2,293,596 | + | C2H12g22641 | CX12g018469 | LOC_Os12g05410 | Os12g0149800 | - | Detail |
| C1H12g16772 | 12:2,293,810-2,297,472 | - | C2H12g14618 | CX12g015371 | LOC_Os12g05420 | Os12g0149900 | - | Detail |
| C1H12g16085 | 12:2,340,148-2,341,871 | - | C2H12g10067 | CX12g018115 | LOC_Os12g05510 | Os12g0150700 | - | Detail |
| C1H12g07376 | 12:2,349,637-2,352,374 | + | C2H12g10170 | CX12g016582 | LOC_Os12g05540 | Os12g0151000 | - | Detail |
| C1H12g16450 | 12:2,365,383-2,372,118 | + | C2H12g01016 | - | - | Os12g0151900 | - | Detail |
| C1H12g08468 | 12:2,366,545-2,367,503 | - | C2H12g20148 | CX12g017701 | LOC_Os12g05590 | Os12g0152000 | Oscen1, FDR1, RCN3, Oscen1/ FDR1 | Detail |
| C1H12g07729 | 12:2,373,440-2,375,234 | + | C2H12g12457 | CX12g018389 | LOC_Os12g05600 | Os12g0152100 | - | Detail |
| C1H12g30150 | 12:2,390,811-2,391,824 | + | C2H12g13362 | CX12g018389 | LOC_Os12g05630 | Os12g0152500 | - | Detail |
| C1H12g00663 | 12:2,395,162-2,397,324 | - | C2H12g01708 | CX12g017206 | LOC_Os12g05640 | Os12g0152600 | - | Detail |
| C1H12g14242 | 12:2,398,304-2,402,880 | - | C2H12g04327 | CX12g016024 | LOC_Os12g05650 | Os12g0152700 | - | Detail |
| C1H12g29017 | 12:2,409,864-2,414,637 | + | C2H12g22774 | CX12g017584 | LOC_Os12g05660 | Os12g0152800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g19215 | 2:10,657,536-10,658,520 | - | C1H2g20410 | CX2g024906 | LOC_Os02g19850 | Os02g0301400 | - | Detail |
| C2H2g27728 | 2:10,659,488-10,664,777 | + | C1H2g19622 | CX2g023759 | LOC_Os02g19860 | Os02g0301500 | - | Detail |
| C2H2g06436 | 2:10,676,917-10,682,370 | + | C1H2g13829 | CX2g019211 | LOC_Os02g19880 | Os02g0301700 | - | Detail |
| C2H2g12907 | 2:10,685,409-10,691,655 | - | C1H2g01468 | CX2g019719 | LOC_Os02g19890 | Os02g0301800 | - | Detail |
| C2H2g12921 | 2:10,704,316-10,708,493 | + | C1H2g10352 | CX2g020708 | LOC_Os05g11260 | Os02g0129000 | - | Detail |
| C2H2g23410 | 2:10,714,789-10,715,109 | + | C1H2g21213 | CX2g019065 | LOC_Os02g19924 | Os02g0302200 | - | Detail |
| C2H2g14534 | 2:10,727,830-10,732,999 | + | C1H2g02298 | CX2g018938 | LOC_Os02g19924 | Os02g0302200 | - | Detail |
| C2H2g03968 | 2:10,742,161-10,746,871 | + | C1H2g02414 | CX2g019065 | LOC_Os02g19970 | Os02g0302700 | - | Detail |
| C2H2g29324 | 2:10,751,099-10,754,127 | + | C1H2g23827 | CX2g021067 | LOC_Os02g19990 | Os02g0302900 | - | Detail |
| C2H2g30452 | 2:10,757,047-10,760,274 | + | C1H2g15481 | CX2g021721 | LOC_Os02g20000 | Os02g0151400 | - | Detail |
| C2H2g20162 | 2:10,774,132-10,775,240 | + | - | - | - | - | - | Detail |
| C2H2g25622 | 2:10,775,242-10,775,822 | + | - | - | - | - | - | Detail |
| C2H2g12665 | 2:10,781,210-10,781,866 | - | C1H2g28540 | CX2g020692 | LOC_Os02g20040 | Os02g0303500 | - | Detail |
| C2H2g23500 | 2:10,797,063-10,798,072 | - | C1H2g02225 | - | - | - | - | Detail |
| C2H2g17796 | 2:10,805,574-10,810,168 | - | C1H2g20120 | CX2g022167 | LOC_Os02g20140 | Os02g0304500 | - | Detail |
| C2H2g06012 | 2:10,810,182-10,810,853 | - | C1H2g20120 | CX2g022167 | LOC_Os02g20140 | Os02g0304500 | - | Detail |
| C2H2g18067 | 2:10,820,939-10,822,567 | + | C1H2g30418 | CX2g019977 | LOC_Os02g20160 | Os02g0304800 | - | Detail |
| C2H2g08676 | 2:10,825,247-10,828,760 | - | C1H2g17236 | CX2g022292 | LOC_Os02g20170 | Os02g0304900 | OsDi19-4 | Detail |
| C2H2g29041 | 2:10,865,132-10,874,331 | - | C1H2g01362 | CX2g020797 | LOC_Os02g20270 | Os02g0305600 | - | Detail |
| C2H2g29231 | 2:10,877,410-10,882,818 | - | C1H2g18344 | CX2g020407 | LOC_Os02g20360 | Os02g0306401 | OsNAAT1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |