| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g23110 | 12:2,163,126-2,165,646 | + | C2H3g00532 | - | - | - | - | Detail |
| C1H12g00004 | 12:2,167,334-2,170,314 | + | C2H12g07258 | CX12g017200 | LOC_Os12g05230 | Os12g0147500 | - | Detail |
| C1H12g27513 | 12:2,197,989-2,198,425 | + | C2H12g29923 | CX12g018143 | LOC_Os12g05260 | Os12g0147800 | OsPSK5, PSK5 | Detail |
| C1H12g14632 | 12:2,223,473-2,235,536 | - | C2H12g11473 | CX12g015934 | LOC_Os12g05310 | Os12g0148400 | - | Detail |
| C1H12g24063 | 12:2,242,369-2,247,718 | + | C2H12g12632 | CX12g016883 | LOC_Os12g05320 | Os12g0148600 | - | Detail |
| C1H12g15447 | 12:2,248,546-2,250,167 | - | C2H12g01567 | CX12g015209 | LOC_Os12g05330 | Os12g0148700 | - | Detail |
| C1H12g30747 | 12:2,263,488-2,266,200 | + | C2H12g09179 | CX12g016510 | LOC_Os12g05360 | Os12g0149000 | - | Detail |
| C1H12g27311 | 12:2,272,260-2,272,586 | - | C2H12g13534 | CX12g017610 | LOC_Os12g05370 | Os11g0150450 | - | Detail |
| C1H12g27756 | 12:2,284,063-2,288,323 | + | C2H12g10982 | CX12g016333 | LOC_Os12g05394 | Os12g0149700 | OsAGC23 | Detail |
| C1H12g08261 | 12:2,292,337-2,293,596 | + | C2H12g22641 | CX12g018469 | LOC_Os12g05410 | Os12g0149800 | - | Detail |
| C1H12g16772 | 12:2,293,810-2,297,472 | - | C2H12g14618 | CX12g015371 | LOC_Os12g05420 | Os12g0149900 | - | Detail |
| C1H12g16085 | 12:2,340,148-2,341,871 | - | C2H12g10067 | CX12g018115 | LOC_Os12g05510 | Os12g0150700 | - | Detail |
| C1H12g07376 | 12:2,349,637-2,352,374 | + | C2H12g10170 | CX12g016582 | LOC_Os12g05540 | Os12g0151000 | - | Detail |
| C1H12g16450 | 12:2,365,383-2,372,118 | + | C2H12g01016 | - | - | Os12g0151900 | - | Detail |
| C1H12g08468 | 12:2,366,545-2,367,503 | - | C2H12g20148 | CX12g017701 | LOC_Os12g05590 | Os12g0152000 | Oscen1, FDR1, RCN3, Oscen1/ FDR1 | Detail |
| C1H12g07729 | 12:2,373,440-2,375,234 | + | C2H12g12457 | CX12g018389 | LOC_Os12g05600 | Os12g0152100 | - | Detail |
| C1H12g30150 | 12:2,390,811-2,391,824 | + | C2H12g13362 | CX12g018389 | LOC_Os12g05630 | Os12g0152500 | - | Detail |
| C1H12g00663 | 12:2,395,162-2,397,324 | - | C2H12g01708 | CX12g017206 | LOC_Os12g05640 | Os12g0152600 | - | Detail |
| C1H12g14242 | 12:2,398,304-2,402,880 | - | C2H12g04327 | CX12g016024 | LOC_Os12g05650 | Os12g0152700 | - | Detail |
| C1H12g29017 | 12:2,409,864-2,414,637 | + | C2H12g22774 | CX12g017584 | LOC_Os12g05660 | Os12g0152800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g09991 | 12:17,726,494-17,727,168 | + | C1H12g08305 | CX12g016328 | LOC_Os12g34440 | Os12g0529200 | - | Detail |
| C2H12g23830 | 12:17,727,205-17,729,220 | + | C1H12g08305 | CX12g016328 | LOC_Os12g34440 | Os12g0529200 | - | Detail |
| C2H12g16177 | 12:17,733,083-17,734,233 | + | C1H12g22186 | CX12g016537 | LOC_Os12g34450 | Os12g0529300 | - | Detail |
| C2H12g29871 | 12:17,734,739-17,736,446 | + | C1H12g26621 | CX12g016869 | LOC_Os12g34450 | Os12g0529400 | - | Detail |
| C2H12g25546 | 12:17,748,819-17,750,348 | + | C1H12g27262 | CX12g015285 | LOC_Os12g34500 | Os12g0529900 | - | Detail |
| C2H12g21736 | 12:17,752,590-17,753,104 | - | C1H12g02312 | CX12g016676 | LOC_Os12g34510 | Os12g0530000 | - | Detail |
| C2H12g27108 | 12:17,754,201-17,760,863 | - | C1H12g01928 | CX12g015313 | LOC_Os12g34524 | Os12g0530100 | - | Detail |
| C2H12g30263 | 12:17,857,823-17,860,641 | + | C1H12g06755 | CX12g018073 | LOC_Os12g34840 | Os12g0533400 | - | Detail |
| C2H12g18128 | 12:17,861,008-17,865,204 | - | C1H12g14770 | CX12g018318 | LOC_Os12g34850 | Os12g0533500 | OsVIL1 | Detail |
| C2H12g06426 | 12:17,867,195-17,868,456 | - | C1H12g20903 | CX12g018330 | LOC_Os12g34854 | Os12g0533600 | - | Detail |
| C2H12g08244 | 12:17,872,139-17,877,027 | + | C1H12g21671 | CX12g016949 | LOC_Os12g34860 | Os12g0533700 | - | Detail |
| C2H12g19325 | 12:17,877,457-17,880,412 | - | C1H12g15465 | CX12g016573 | LOC_Os12g34870 | Os12g0533800 | - | Detail |
| C2H12g05988 | 12:17,881,443-17,886,309 | - | C1H12g00880 | CX12g016651 | LOC_Os12g34874 | Os12g0534000 | - | Detail |
| C2H12g11234 | 12:17,889,502-17,890,790 | - | C1H12g20074 | CX12g017851 | LOC_Os12g34880 | Os12g0534100 | - | Detail |
| C2H12g08685 | 12:17,891,913-17,894,522 | - | C1H12g17228 | CX12g016361 | LOC_Os12g34890 | Os12g0534200 | - | Detail |
| C2H12g25724 | 12:17,896,663-17,900,131 | + | C1H12g06202 | CX12g016513 | LOC_Os12g34920 | Os12g0534700 | - | Detail |
| C2H12g18227 | 12:17,903,878-17,906,776 | + | C1H12g12651 | CX12g015705 | LOC_Os12g34970 | Os12g0535300 | - | Detail |
| C2H12g26676 | 12:17,908,509-17,910,530 | + | C1H12g03484 | CX12g016360 | LOC_Os12g35030 | Os12g0535900 | - | Detail |
| C2H12g06817 | 12:17,911,453-17,914,296 | - | C1H12g29979 | CX12g015687 | LOC_Os12g35040 | Os12g0536000 | TCM12, iPGAM | Detail |
| C2H12g28375 | 12:17,917,002-17,922,727 | + | C1H12g12527 | - | LOC_Os12g35060 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |