| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g26347 | 12:1,987,107-1,987,328 | + | C2H11g12348 | CX12g016356 | LOC_Os12g04924 | Os12g0143100 | - | Detail |
| C1H12g23605 | 12:1,987,383-1,992,947 | + | C2H12g17505 | CX12g015488 | LOC_Os12g04930 | Os12g0143200 | OsASHL1 | Detail |
| C1H12g20952 | 12:1,995,364-1,995,699 | - | C2H12g04572 | CX12g018267 | LOC_Os12g04934 | Os12g0143300 | - | Detail |
| C1H12g29028 | 12:1,997,289-2,001,884 | - | C2H12g15233 | CX12g016016 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| C1H12g04669 | 12:2,003,442-2,006,621 | - | C2H12g15233 | CX11g014000 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| C1H12g22085 | 12:2,008,410-2,008,969 | - | C2H12g29588 | - | - | - | - | Detail |
| C1H12g20218 | 12:2,021,107-2,024,830 | - | C2H12g30125 | CX12g015864 | LOC_Os12g04980 | Os12g0143800 | DMC1A, OsDMC1A, OsDmc1A, Dmc1A, DMC1, OsDMC1, RiLIM15A | Detail |
| C1H12g18494 | 12:2,026,187-2,033,815 | + | C2H12g21227 | CX12g016038 | LOC_Os12g04990 | Os12g0143900 | - | Detail |
| C1H12g14180 | 12:2,036,614-2,039,947 | + | C2H12g14580 | CX12g018054 | LOC_Os12g05000 | Os12g0144000 | - | Detail |
| C1H12g00146 | 12:2,042,619-2,046,522 | + | C2H12g26458 | CX12g015780 | LOC_Os12g05020 | Os12g0144200 | - | Detail |
| C1H12g05256 | 12:2,060,087-2,062,513 | + | C2H12g10724 | CX12g018220 | LOC_Os12g05040 | Os12g0144600 | - | Detail |
| C1H12g22183 | 12:2,089,272-2,092,419 | - | C2H12g16995 | CX12g015697 | LOC_Os12g05050 | Os12g0145100 | - | Detail |
| C1H12g30331 | 12:2,103,104-2,106,502 | + | C2H12g10193 | CX12g015693 | LOC_Os12g05080 | Os12g0145400 | - | Detail |
| C1H12g05368 | 12:2,108,237-2,111,300 | + | C2H12g10516 | CX12g018278 | LOC_Os12g05090 | Os12g0145500 | - | Detail |
| C1H12g27500 | 12:2,112,187-2,114,890 | + | C2H12g04534 | CX12g018616 | LOC_Os11g05100 | Os11g0148400 | - | Detail |
| C1H12g17220 | 12:2,115,396-2,119,755 | - | C2H12g14726 | CX12g018156 | LOC_Os12g05110 | Os12g0145700 | OsPK4 | Detail |
| C1H12g13628 | 12:2,121,163-2,124,075 | - | C2H12g30566 | CX12g015785 | LOC_Os12g05120 | Os12g0145900 | - | Detail |
| C1H12g01108 | 12:2,135,485-2,136,298 | - | C2H12g15061 | CX12g018716 | LOC_Os12g05170 | Os12g0146400 | - | Detail |
| C1H12g25187 | 12:2,138,107-2,139,844 | - | C2H12g20480 | CX12g018292 | LOC_Os12g05180 | Os12g0146500 | - | Detail |
| C1H12g12080 | 12:2,156,235-2,159,471 | + | C2H12g30172 | CX12g016051 | LOC_Os12g05200 | Os12g0147000 | OsAHL20 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g16455 | 12:1,307,270-1,310,449 | - | C1H12g17444 | CX12g015059 | LOC_Os12g03750 | Os12g0131701 | - | Detail |
| C2H12g17528 | 12:1,323,355-1,329,415 | + | C1H12g22988 | CX12g018100 | LOC_Os12g03740 | Os12g0131400 | - | Detail |
| C2H12g18228 | 12:1,335,408-1,335,776 | + | C1H12g22988 | CX12g018100 | LOC_Os12g03740 | Os12g0131400 | - | Detail |
| C2H12g09331 | 12:1,353,929-1,356,251 | - | C1H12g17444 | CX12g015059 | LOC_Os12g03750 | Os12g0489800 | - | Detail |
| C2H12g26837 | 12:1,406,318-1,407,200 | + | C1H12g14356 | - | - | - | - | Detail |
| C2H12g25798 | 12:1,407,332-1,407,538 | + | C1H12g18819 | CX12g016220 | - | - | - | Detail |
| C2H12g21094 | 12:1,407,673-1,408,008 | + | C1H12g26172 | CX12g016173 | LOC_Os12g06930 | - | - | Detail |
| C2H12g15851 | 12:1,431,997-1,437,223 | - | C1H12g09635 | CX12g017965 | LOC_Os12g03720 | Os12g0131150 | - | Detail |
| C2H12g29504 | 12:1,440,101-1,442,926 | + | C1H12g19116 | CX12g017842 | LOC_Os12g03730 | Os12g0131200 | - | Detail |
| C2H12g21923 | 12:1,443,466-1,444,099 | - | C1H12g05970 | CX12g016235 | LOC_Os11g03920 | Os12g0131266 | - | Detail |
| C2H12g30346 | 12:1,444,109-1,444,675 | - | C1H12g16146 | - | - | - | - | Detail |
| C2H12g04882 | 12:1,445,115-1,450,348 | - | C1H12g22049 | CX12g015993 | LOC_Os12g03790 | Os12g0131900 | - | Detail |
| C2H12g26793 | 12:1,458,830-1,463,931 | + | C1H12g27375 | CX12g015231 | LOC_Os12g03810 | Os12g0132200 | - | Detail |
| C2H12g09084 | 12:1,460,509-1,464,915 | - | C1H12g17838 | CX12g016449 | LOC_Os12g03816 | Os12g0132300 | OsCML3 | Detail |
| C2H12g06878 | 12:1,466,000-1,469,957 | - | C1H12g18740 | CX12g016015 | LOC_Os12g03822 | Os12g0132400 | OsRIP1 | Detail |
| C2H12g15683 | 12:1,470,891-1,471,272 | - | C1H12g16357 | CX12g015235 | - | - | - | Detail |
| C2H12g25753 | 12:1,476,656-1,481,074 | - | C1H12g09294 | - | LOC_Os12g03830 | Os12g0132500 | - | Detail |
| C2H12g10240 | 12:1,485,214-1,489,768 | - | C1H12g05342 | - | LOC_Os12g03860 | Os12g0132800 | - | Detail |
| C2H12g14231 | 12:1,495,216-1,496,581 | + | C1H12g05091 | - | - | Os12g0132900 | - | Detail |
| C2H12g02432 | 12:1,497,080-1,502,175 | - | C1H12g13868 | - | LOC_Os12g03870 | Os12g0133000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |