| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g26347 | 12:1,987,107-1,987,328 | + | C2H11g12348 | CX12g016356 | LOC_Os12g04924 | Os12g0143100 | - | Detail |
| C1H12g23605 | 12:1,987,383-1,992,947 | + | C2H12g17505 | CX12g015488 | LOC_Os12g04930 | Os12g0143200 | OsASHL1 | Detail |
| C1H12g20952 | 12:1,995,364-1,995,699 | - | C2H12g04572 | CX12g018267 | LOC_Os12g04934 | Os12g0143300 | - | Detail |
| C1H12g29028 | 12:1,997,289-2,001,884 | - | C2H12g15233 | CX12g016016 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| C1H12g04669 | 12:2,003,442-2,006,621 | - | C2H12g15233 | CX11g014000 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| C1H12g22085 | 12:2,008,410-2,008,969 | - | C2H12g29588 | - | - | - | - | Detail |
| C1H12g20218 | 12:2,021,107-2,024,830 | - | C2H12g30125 | CX12g015864 | LOC_Os12g04980 | Os12g0143800 | DMC1A, OsDMC1A, OsDmc1A, Dmc1A, DMC1, OsDMC1, RiLIM15A | Detail |
| C1H12g18494 | 12:2,026,187-2,033,815 | + | C2H12g21227 | CX12g016038 | LOC_Os12g04990 | Os12g0143900 | - | Detail |
| C1H12g14180 | 12:2,036,614-2,039,947 | + | C2H12g14580 | CX12g018054 | LOC_Os12g05000 | Os12g0144000 | - | Detail |
| C1H12g00146 | 12:2,042,619-2,046,522 | + | C2H12g26458 | CX12g015780 | LOC_Os12g05020 | Os12g0144200 | - | Detail |
| C1H12g05256 | 12:2,060,087-2,062,513 | + | C2H12g10724 | CX12g018220 | LOC_Os12g05040 | Os12g0144600 | - | Detail |
| C1H12g22183 | 12:2,089,272-2,092,419 | - | C2H12g16995 | CX12g015697 | LOC_Os12g05050 | Os12g0145100 | - | Detail |
| C1H12g30331 | 12:2,103,104-2,106,502 | + | C2H12g10193 | CX12g015693 | LOC_Os12g05080 | Os12g0145400 | - | Detail |
| C1H12g05368 | 12:2,108,237-2,111,300 | + | C2H12g10516 | CX12g018278 | LOC_Os12g05090 | Os12g0145500 | - | Detail |
| C1H12g27500 | 12:2,112,187-2,114,890 | + | C2H12g04534 | CX12g018616 | LOC_Os11g05100 | Os11g0148400 | - | Detail |
| C1H12g17220 | 12:2,115,396-2,119,755 | - | C2H12g14726 | CX12g018156 | LOC_Os12g05110 | Os12g0145700 | OsPK4 | Detail |
| C1H12g13628 | 12:2,121,163-2,124,075 | - | C2H12g30566 | CX12g015785 | LOC_Os12g05120 | Os12g0145900 | - | Detail |
| C1H12g01108 | 12:2,135,485-2,136,298 | - | C2H12g15061 | CX12g018716 | LOC_Os12g05170 | Os12g0146400 | - | Detail |
| C1H12g25187 | 12:2,138,107-2,139,844 | - | C2H12g20480 | CX12g018292 | LOC_Os12g05180 | Os12g0146500 | - | Detail |
| C1H12g12080 | 12:2,156,235-2,159,471 | + | C2H12g30172 | CX12g016051 | LOC_Os12g05200 | Os12g0147000 | OsAHL20 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g27183 | 9:1,912,343-1,913,338 | + | C1H9g09088 | CX9g054970 | LOC_Os09g04430 | Os09g0130700 | - | Detail |
| C2H9g12382 | 9:1,915,410-1,922,724 | - | - | CX9g056905 | LOC_Os09g04440 | Os09g0130800 | - | Detail |
| C2H9g22625 | 9:1,952,380-1,953,210 | + | C1H9g27936 | CX9g055622 | LOC_Os09g04490 | Os09g0131200 | - | Detail |
| C2H9g11221 | 9:1,993,742-2,006,059 | + | C1H9g00923 | CX9g056587 | LOC_Os09g04624 | Os09g0132200 | - | Detail |
| C2H9g26710 | 9:2,050,458-2,053,941 | - | C1H9g25123 | CX9g055949 | LOC_Os09g04670 | Os09g0132600 | OsMORF8-1 | Detail |
| C2H9g12342 | 9:2,062,200-2,063,205 | + | C1H9g00018 | CX9g058101 | LOC_Os09g04710 | Os09g0132900 | - | Detail |
| C2H9g28536 | 9:2,066,366-2,068,511 | - | C1H9g13386 | CX9g056234 | LOC_Os09g04720 | Os09g0133000 | - | Detail |
| C2H9g12722 | 9:2,074,260-2,079,046 | - | C1H9g21676 | CX9g056571 | LOC_Os09g04730 | Os09g0133200 | - | Detail |
| C2H9g19729 | 9:2,081,464-2,081,799 | - | - | CX9g055921 | LOC_Os09g04760 | - | - | Detail |
| C2H9g28504 | 9:2,087,418-2,087,861 | + | C1H9g18841 | CX9g056741 | LOC_Os09g04790 | Os09g0133600 | - | Detail |
| C2H9g02102 | 9:2,093,789-2,095,298 | + | C1H9g18841 | CX9g056319 | LOC_Os09g04790 | Os09g0133600 | - | Detail |
| C2H9g30446 | 9:2,131,338-2,135,509 | + | C1H9g06051 | CX9g054843 | LOC_Os09g04800 | Os09g0133700 | - | Detail |
| C2H9g23487 | 9:2,136,259-2,139,943 | - | C1H9g04091 | CX9g057963 | LOC_Os09g04810 | Os09g0133800 | - | Detail |
| C2H9g09354 | 9:2,166,591-2,169,983 | + | C1H9g27229 | CX9g057669 | LOC_Os09g04880 | Os09g0134400 | - | Detail |
| C2H9g17319 | 9:2,170,862-2,185,380 | - | C1H9g22500 | CX9g055891 | LOC_Os09g04890 | Os09g0134500 | OsTrx1, SDG723, OsSET33 | Detail |
| C2H9g01165 | 9:2,221,644-2,222,126 | - | C1H9g06373 | CX9g057577 | - | - | - | Detail |
| C2H9g07437 | 9:2,230,030-2,232,094 | + | - | - | - | - | - | Detail |
| C2H9g12220 | 9:2,231,846-2,233,327 | - | - | CX9g057295 | - | Os04g0576400 | - | Detail |
| C2H9g15613 | 9:2,235,712-2,237,471 | + | - | - | - | - | - | Detail |
| C2H9g10012 | 9:2,258,695-2,260,690 | - | - | CX9g056543 | LOC_Os09g04924 | Os09g0134900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |