| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g02118 | 12:1,763,630-1,764,689 | + | C2H12g17026 | CX12g015145 | LOC_Os12g04424 | Os12g0138800 | - | Detail |
| C1H12g08849 | 12:1,765,333-1,766,998 | + | C2H12g16805 | CX12g016675 | LOC_Os12g04424 | Os12g0138800 | - | Detail |
| C1H12g04455 | 12:1,767,911-1,773,847 | + | C2H12g26667 | CX12g018579 | LOC_Os12g04440 | Os12g0138900 | - | Detail |
| C1H12g12805 | 12:1,775,015-1,775,635 | + | C2H12g06048 | CX12g018621 | LOC_Os12g04450 | Os12g0143750 | - | Detail |
| C1H12g26225 | 12:1,780,335-1,781,021 | + | C2H12g06048 | CX12g018280 | LOC_Os12g04460 | Os12g0139100 | - | Detail |
| C1H12g06694 | 12:1,789,137-1,793,105 | - | C2H12g06757 | CX12g016143 | LOC_Os12g04480 | Os12g0139300 | OsCPD2, CYP90A4, OsCPD2/CYP90A4 | Detail |
| C1H12g23746 | 12:1,798,012-1,799,620 | + | C2H11g05956 | CX12g018440 | LOC_Os12g04500 | Os12g0139400 | RR10, OsRR10, Rra2, OsRRA2 | Detail |
| C1H12g15530 | 12:1,800,125-1,802,641 | - | C2H12g06221 | CX12g017687 | LOC_Os12g04510 | Os12g0139500 | - | Detail |
| C1H12g28135 | 12:1,804,273-1,808,695 | - | C2H12g02892 | CX12g016258 | LOC_Os12g04520 | Os12g0139600 | - | Detail |
| C1H12g25083 | 12:1,813,032-1,814,411 | - | C2H12g30338 | CX12g018085 | LOC_Os12g04540 | Os12g0139800 | - | Detail |
| C1H12g21714 | 12:1,825,818-1,839,019 | - | C2H12g20924 | CX12g016311 | LOC_Os12g04590 | Os12g0140200 | - | Detail |
| C1H12g30903 | 12:1,844,642-1,845,920 | + | C2H12g29989 | CX12g018613 | LOC_Os12g04640 | Os12g0514000 | OsPLT15 | Detail |
| C1H12g31125 | 12:1,848,426-1,848,941 | + | C2H12g06061 | CX12g018621 | LOC_Os12g04650 | Os12g0140600 | - | Detail |
| C1H12g27391 | 12:1,866,695-1,870,258 | - | C2H12g11552 | CX12g016459 | LOC_Os12g04700 | Os12g0141100 | - | Detail |
| C1H12g26478 | 12:1,886,237-1,886,740 | - | C2H12g27853 | CX12g018041 | LOC_Os12g04720 | - | - | Detail |
| C1H12g21661 | 12:1,894,861-1,895,607 | - | C2H12g26074 | CX12g017803 | LOC_Os12g04740 | Os12g0141500 | - | Detail |
| C1H12g04993 | 12:1,898,563-1,898,938 | - | C2H12g19377 | CX12g017719 | - | Os12g0141600 | - | Detail |
| C1H12g30941 | 12:1,899,187-1,904,587 | - | C2H12g09406 | CX12g017719 | LOC_Os12g04750 | Os12g0141600 | - | Detail |
| C1H12g08865 | 12:1,910,287-1,912,374 | + | - | CX12g015814 | LOC_Os12g04770 | Os12g0141800 | - | Detail |
| C1H12g04512 | 12:1,918,536-1,922,193 | - | C2H12g13165 | CX12g017921 | - | Os12g0141900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g08049 | 9:17,106,192-17,110,239 | + | C1H9g09147 | CX9g055676 | LOC_Os09g34280 | Os09g0518500 | - | Detail |
| C2H9g03145 | 9:17,111,112-17,112,738 | - | C1H9g05389 | CX9g056764 | LOC_Os09g34290 | Os09g0518600 | - | Detail |
| C2H9g00047 | 9:17,113,261-17,117,988 | - | C1H9g00022 | CX9g055254 | LOC_Os09g34300 | Os09g0518700 | - | Detail |
| C2H9g05387 | 9:17,121,018-17,121,364 | + | C1H9g22729 | CX9g057932 | LOC_Os09g34310 | - | - | Detail |
| C2H9g03669 | 9:17,136,833-17,137,684 | - | C1H9g17507 | CX9g055953 | LOC_Os09g34330 | Os09g0519100 | - | Detail |
| C2H9g27958 | 9:17,152,641-17,153,345 | - | C1H9g15652 | - | - | - | - | Detail |
| C2H9g18367 | 9:17,154,193-17,154,728 | - | - | CX9g055320 | - | - | - | Detail |
| C2H9g09976 | 9:17,169,909-17,170,387 | - | C1H9g20303 | CX9g055247 | LOC_Os09g34850 | Os09g0520100 | - | Detail |
| C2H9g00711 | 9:17,173,961-17,177,726 | + | C1H9g03744 | CX9g055700 | LOC_Os09g34860 | Os09g0520200 | - | Detail |
| C2H9g21344 | 9:17,183,328-17,186,760 | + | C1H9g02310 | CX9g057384 | LOC_Os09g34880 | Os09g0520400 | OsbZIP76 | Detail |
| C2H9g01771 | 9:17,187,648-17,188,566 | - | C1H9g04530 | CX9g055638 | LOC_Os09g34890 | Os09g0520500 | - | Detail |
| C2H9g21190 | 9:17,194,191-17,196,038 | + | C1H9g24828 | CX9g056986 | LOC_Os09g32780 | - | - | Detail |
| C2H9g04653 | 9:17,198,200-17,201,593 | - | C1H9g25767 | CX9g055686 | LOC_Os09g34900 | Os09g0520600 | - | Detail |
| C2H9g24414 | 9:17,203,671-17,208,113 | + | C1H9g15041 | CX9g058165 | LOC_Os09g34910 | Os09g0520700 | - | Detail |
| C2H9g26435 | 9:17,210,613-17,212,283 | - | C1H9g08027 | CX9g057097 | LOC_Os09g34920 | Os09g0520800 | - | Detail |
| C2H9g20646 | 9:17,217,677-17,219,140 | + | C1H9g02380 | CX9g056068 | LOC_Os09g34930 | Os09g0521100 | - | Detail |
| C2H9g27081 | 9:17,224,566-17,224,824 | + | - | - | - | - | - | Detail |
| C2H9g13839 | 9:17,224,975-17,225,742 | + | - | - | - | Os09g0521350 | - | Detail |
| C2H9g14810 | 9:17,228,140-17,231,908 | + | C1H9g10520 | CX9g057233 | LOC_Os09g34960 | Os09g0521400 | - | Detail |
| C2H9g26372 | 9:17,232,528-17,235,955 | - | C1H9g25845 | CX9g055738 | LOC_Os09g34970 | Os09g0521500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |