| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g07612 | 12:1,624,927-1,627,391 | - | C2H12g07745 | CX12g017796 | LOC_Os12g04160 | Os12g0135900 | - | Detail |
| C1H12g15908 | 12:1,634,200-1,637,429 | + | C2H12g11889 | CX12g016479 | LOC_Os12g04180 | Os12g0136200 | - | Detail |
| C1H12g23258 | 12:1,639,839-1,640,494 | - | C2H11g24596 | - | - | - | - | Detail |
| C1H12g12861 | 12:1,640,608-1,642,015 | - | C2H12g10790 | - | - | Os11g0139550 | - | Detail |
| C1H12g07242 | 12:1,642,031-1,642,739 | - | C2H12g27970 | - | - | Os12g0136300 | - | Detail |
| C1H12g11454 | 12:1,652,829-1,658,912 | - | C2H12g09437 | CX12g017709 | LOC_Os11g04420 | Os11g0139900 | - | Detail |
| C1H12g29999 | 12:1,660,866-1,662,572 | - | C2H12g00717 | CX11g013028 | LOC_Os12g04210 | Os11g0139900 | - | Detail |
| C1H12g24298 | 12:1,664,510-1,665,047 | - | C2H12g07042 | CX12g017945 | LOC_Os12g04210 | Os12g0136600 | - | Detail |
| C1H12g28355 | 12:1,665,882-1,672,525 | + | C2H12g25478 | CX12g018408 | LOC_Os12g04220 | Os12g0136900 | - | Detail |
| C1H12g30611 | 12:1,677,734-1,680,477 | - | C2H12g16637 | CX12g016318 | LOC_Os12g04240 | Os12g0137100 | - | Detail |
| C1H12g30370 | 12:1,684,690-1,688,584 | + | C2H12g14263 | CX12g018417 | LOC_Os12g04260 | Os12g0137200 | - | Detail |
| C1H12g23515 | 12:1,688,853-1,692,226 | - | C2H12g25110 | CX12g016382 | LOC_Os12g04270 | Os12g0137300 | - | Detail |
| C1H12g19285 | 12:1,699,784-1,703,618 | + | C2H12g13621 | CX12g015056 | LOC_Os12g04290 | Os12g0137500 | - | Detail |
| C1H12g17056 | 12:1,704,285-1,705,109 | - | C2H12g02518 | CX12g017342 | LOC_Os12g04300 | Os12g0137600 | - | Detail |
| C1H12g06551 | 12:1,712,934-1,713,950 | - | C2H12g02518 | CX12g016430 | LOC_Os12g04350 | Os12g0137700 | - | Detail |
| C1H12g16466 | 12:1,720,232-1,721,528 | - | - | CX12g015111 | - | - | - | Detail |
| C1H12g18257 | 12:1,728,683-1,734,174 | - | C2H12g08235 | CX12g015181 | LOC_Os12g04370 | Os12g0138100 | - | Detail |
| C1H12g23438 | 12:1,730,274-1,732,383 | + | - | - | - | - | - | Detail |
| C1H12g03320 | 12:1,749,341-1,751,789 | + | C2H12g06655 | CX12g017048 | LOC_Os12g04410 | Os12g0138500 | OsBOP3, NH5 | Detail |
| C1H12g29309 | 12:1,761,447-1,761,975 | + | C2H12g17563 | CX12g018607 | LOC_Os12g06020 | Os12g0138700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20318 | 4:23,380,102-23,380,731 | + | - | CX4g032986 | LOC_Os04g45834 | Os04g0542000 | OsS40-5 | Detail |
| C2H4g15404 | 4:23,387,657-23,390,558 | - | C1H4g01207 | CX4g036589 | LOC_Os04g45860 | Os04g0542200 | - | Detail |
| C2H4g15215 | 4:23,390,655-23,391,125 | - | C1H4g01207 | CX4g036589 | LOC_Os04g45860 | Os04g0542200 | - | Detail |
| C2H4g05921 | 4:23,402,042-23,405,453 | - | C1H4g26797 | CX4g034574 | LOC_Os04g45900 | Os04g0542800 | YSL16, OsYSL16, Os-YSL16, OsYs14 | Detail |
| C2H4g03772 | 4:23,410,292-23,413,618 | + | C1H4g00917 | CX4g031872 | LOC_Os04g45910 | Os04g0542900 | - | Detail |
| C2H4g18044 | 4:23,413,925-23,415,547 | - | C1H4g12022 | CX4g033127 | LOC_Os04g45920 | Os04g0543000 | OsRLCK155 | Detail |
| C2H4g06135 | 4:23,429,014-23,433,474 | + | C1H4g12009 | CX4g031771 | LOC_Os04g45930 | Os04g0543200 | - | Detail |
| C2H4g28036 | 4:23,439,432-23,440,064 | + | C1H4g29842 | CX4g033722 | LOC_Os04g45940 | Os04g0543500 | - | Detail |
| C2H4g07566 | 4:23,442,911-23,446,114 | - | C1H4g23068 | CX4g033912 | LOC_Os04g45950 | Os04g0543600 | - | Detail |
| C2H4g03875 | 4:23,446,261-23,446,641 | - | C1H4g23068 | CX4g033912 | - | Os02g0655700 | - | Detail |
| C2H4g23324 | 4:23,449,934-23,454,406 | + | C1H4g25515 | CX4g032899 | LOC_Os04g45960 | Os04g0543700 | OsMSP | Detail |
| C2H4g27717 | 4:23,460,578-23,465,286 | + | C1H4g25512 | CX4g035856 | LOC_Os04g45970 | Os04g0543900 | - | Detail |
| C2H4g03252 | 4:23,470,363-23,470,812 | + | - | CX4g032582 | LOC_Os04g45980 | Os04g0544000 | - | Detail |
| C2H4g24460 | 4:23,473,283-23,475,811 | - | C1H4g13260 | CX4g031976 | LOC_Os04g45990 | Os04g0544100 | SDG703 | Detail |
| C2H4g09721 | 4:23,481,284-23,483,216 | - | C1H4g05097 | CX4g031985 | LOC_Os04g46000 | Os04g0544200 | OsCYCP4;4 | Detail |
| C2H4g14132 | 4:23,485,628-23,487,989 | - | C1H4g03288 | CX4g036665 | LOC_Os04g46010 | Os04g0544400 | - | Detail |
| C2H4g05003 | 4:23,489,787-23,493,126 | - | C1H4g26782 | CX4g032526 | LOC_Os04g46020 | Os04g0544500 | - | Detail |
| C2H4g02497 | 4:23,503,765-23,510,671 | - | C1H4g29118 | CX4g034792 | LOC_Os04g46050 | Os04g0544900 | - | Detail |
| C2H4g17284 | 4:23,511,983-23,513,401 | - | C1H4g17617 | CX4g035537 | LOC_Os04g46060 | Os04g0545000 | OsWRKY36, SGSD3 | Detail |
| C2H4g22662 | 4:23,516,885-23,517,627 | - | C1H4g13000 | CX4g035537 | LOC_Os04g46060 | Os04g0545000 | OsWRKY36, SGSD3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |