| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g07094 | 12:1,500,244-1,500,751 | - | C2H12g04645 | - | LOC_Os11g04104 | Os12g0133100 | OsVMT, OsZIFL12, OsVMT/OsZIFL12 | Detail |
| C1H12g02841 | 12:1,506,797-1,507,126 | + | C2H12g04214 | CX12g018506 | LOC_Os12g03920 | Os12g0518200 | OsDUF6 | Detail |
| C1H12g21650 | 12:1,509,319-1,510,968 | + | C2H12g02838 | CX12g018506 | LOC_Os12g03920 | Os12g0518200 | OsDUF6 | Detail |
| C1H12g00189 | 12:1,514,840-1,523,052 | - | C2H12g26253 | - | LOC_Os12g03950 | Os12g0133300 | - | Detail |
| C1H12g27817 | 12:1,525,800-1,527,156 | + | C2H12g30444 | CX12g015267 | LOC_Os12g03960 | Os12g0133400 | - | Detail |
| C1H12g15237 | 12:1,527,829-1,529,965 | + | C2H12g10222 | CX12g018659 | LOC_Os12g03970 | Os12g0133500 | OsCPK26 | Detail |
| C1H12g29110 | 12:1,531,623-1,531,820 | - | C2H12g11861 | CX12g015288 | LOC_Os12g03980 | Os12g0133600 | - | Detail |
| C1H12g04680 | 12:1,532,724-1,534,879 | - | C2H12g22177 | CX12g017140 | LOC_Os12g03990 | Os12g0133700 | - | Detail |
| C1H12g21432 | 12:1,538,702-1,541,721 | - | C2H12g11358 | CX12g018350 | LOC_Os12g04000 | Os12g0133800 | OsPIN1d | Detail |
| C1H12g29892 | 12:1,545,800-1,550,890 | - | C2H12g09127 | CX12g018288 | LOC_Os12g04010 | Os12g0133900 | - | Detail |
| C1H12g11846 | 12:1,553,509-1,557,040 | + | C2H12g28374 | CX12g015977 | LOC_Os12g04020 | Os12g0134000 | - | Detail |
| C1H12g20440 | 12:1,557,415-1,573,235 | - | C2H12g25164 | CX12g015093 | LOC_Os12g04030 | Os12g0134200 | - | Detail |
| C1H12g28477 | 12:1,573,484-1,580,640 | + | C2H12g04115 | CX12g016579 | LOC_Os12g04060 | Os12g0134300 | - | Detail |
| C1H12g06754 | 12:1,581,408-1,581,942 | - | C2H12g17966 | CX12g018121 | LOC_Os12g04090 | Os12g0134500 | - | Detail |
| C1H12g27630 | 12:1,582,232-1,583,581 | - | C2H12g01480 | CX12g016834 | LOC_Os12g04080 | Os12g0134700 | - | Detail |
| C1H12g09535 | 12:1,587,799-1,591,268 | - | C2H12g04217 | CX12g018605 | LOC_Os12g04110 | Os12g0135000 | - | Detail |
| C1H12g28951 | 12:1,591,961-1,593,460 | - | C2H12g24794 | CX12g018811 | LOC_Os12g04110 | Os12g0135051 | - | Detail |
| C1H12g20775 | 12:1,598,683-1,599,657 | - | C2H12g14583 | CX12g018811 | LOC_Os12g04120 | Os12g0135100 | - | Detail |
| C1H12g25100 | 12:1,614,003-1,615,091 | + | C2H12g12174 | CX12g016932 | LOC_Os12g04140 | Os12g0135500 | - | Detail |
| C1H12g10549 | 12:1,618,842-1,619,963 | + | C2H12g12174 | CX12g016070 | LOC_Os12g04140 | Os12g0135500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g05986 | 2:22,206,507-22,208,137 | - | C1H2g04029 | CX2g024195 | LOC_Os02g39290 | Os02g0605500 | - | Detail |
| C2H2g03632 | 2:22,209,247-22,214,326 | + | C1H2g18196 | CX2g018863 | LOC_Os02g39300 | Os02g0605600 | - | Detail |
| C2H2g26905 | 2:22,218,790-22,219,083 | + | - | CX2g018843 | - | - | - | Detail |
| C2H2g09889 | 2:22,221,445-22,222,353 | - | C1H2g01541 | CX2g024284 | LOC_Os02g39330 | Os02g0605900 | - | Detail |
| C2H2g25949 | 2:22,225,755-22,227,580 | + | C1H2g23872 | CX2g020246 | LOC_Os02g39340 | Os02g0606000 | OsDG2 | Detail |
| C2H2g05849 | 2:22,228,233-22,232,365 | - | C1H2g17427 | CX2g020920 | LOC_Os02g39350 | Os02g0606100 | - | Detail |
| C2H2g23595 | 2:22,237,132-22,238,082 | + | C1H2g18454 | CX2g023817 | LOC_Os02g39360 | Os02g0606200 | RNG1 | Detail |
| C2H2g13324 | 2:22,238,561-22,243,868 | - | C1H2g28246 | CX2g018890 | LOC_Os02g39370 | Os02g0606300 | - | Detail |
| C2H2g29463 | 2:22,246,882-22,247,192 | - | C1H2g08728 | CX2g019244 | LOC_Os02g39384 | Os02g0606600 | - | Detail |
| C2H2g15776 | 2:22,248,681-22,250,931 | + | C1H2g20224 | CX2g022170 | LOC_Os02g39390 | Os02g0606700 | RSS1 | Detail |
| C2H2g29237 | 2:22,251,715-22,253,877 | + | C1H2g27913 | CX2g018997 | LOC_Os02g39400 | Os02g0606800 | - | Detail |
| C2H2g26702 | 2:22,255,188-22,258,589 | - | C1H2g08347 | CX2g019749 | LOC_Os02g39410 | Os02g0606900 | - | Detail |
| C2H2g08348 | 2:22,260,290-22,261,019 | - | C1H2g10387 | - | LOC_Os02g39410 | - | - | Detail |
| C2H2g18169 | 2:22,265,464-22,265,775 | - | C1H2g21841 | CX2g021356 | LOC_Os02g39420 | Os02g0607000 | - | Detail |
| C2H2g24959 | 2:22,265,790-22,266,809 | - | C1H2g21841 | CX2g021356 | LOC_Os02g39260 | Os02g0605000 | - | Detail |
| C2H2g04655 | 2:22,273,183-22,274,385 | - | C1H2g22579 | CX2g023372 | LOC_Os02g39430 | Os02g0607100 | - | Detail |
| C2H2g20826 | 2:22,278,848-22,279,135 | + | C1H4g06341 | CX6g044647 | - | - | - | Detail |
| C2H2g23887 | 2:22,295,830-22,300,249 | - | C1H2g06459 | CX2g019749 | LOC_Os02g39470 | Os02g0606900 | - | Detail |
| C2H2g28959 | 2:22,302,604-22,307,529 | - | C1H2g25391 | CX2g020559 | LOC_Os02g39480 | Os02g0607500 | - | Detail |
| C2H2g15517 | 2:22,317,295-22,322,317 | - | C1H2g17149 | CX2g021915 | LOC_Os02g39490 | Os02g0607700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |